Pseudodesulfovibrio sediminis: PSDVSF_30230
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Entry
PSDVSF_30230 CDS
T08380
Symbol
hdrB
Name
(GenBank) heterodisulfide reductase subunit B
KO
K03389
heterodisulfide reductase subunit B2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
psef
Pseudodesulfovibrio sediminis
Pathway
psef00680
Methane metabolism
psef01100
Metabolic pathways
psef01120
Microbial metabolism in diverse environments
psef01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
psef00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
PSDVSF_30230 (hdrB)
Enzymes [BR:
psef01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
PSDVSF_30230 (hdrB)
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
PSDVSF_30230 (hdrB)
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
PSDVSF_30230 (hdrB)
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
PSDVSF_30230 (hdrB)
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Gene cluster
GFIT
Motif
Pfam:
CCG
Pput2613-deam
Motif
Other DBs
NCBI-ProteinID:
BCS89781
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Position
complement(3207814..3208713)
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AA seq
299 aa
AA seq
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MSSSLTFAYYPGCSGLGTSLEYDTSTRAICAALGVELVDIPDWSCCGSTPAHTVDHTLSS
ALSARNIAQAEELDVQGIITPCPSCLTNLKTASHRMEDEAFKEKVNKLLEKPVENKLPIM
SVLQLLHEQVGVEKVAEKVVKPLEGLRLAPYYGCIMNRPPEVMNFDDCENPIAMDELMAA
LGADVAPFPLKVECCGASFGVARKDIVAKLSGKLLDAAEDVEAHAFVTACPLCQMNLDLR
QSQVNSLTGSKHDMPVFYYTQLIGKALGLDAKSLQMDKLCVPPSKAFRKMEEAQQANAS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcttcccttactttcgcatactaccctggctgttccgggctaggaacatccctc
gagtacgacacatccacccgcgccatctgtgcggctctgggtgtcgaactggtggatatt
cccgattggagctgttgtggctcgaccccggcacacaccgtggaccacactctttcctcc
gcgctctcggcccgcaatattgcccaggccgaagaactggacgtacagggtatcatcacg
ccttgccccagctgtttgaccaacctgaagactgccagtcaccgtatggaagacgaagca
ttcaaggaaaaggtcaacaaactgctggaaaagccggttgaaaacaaactgcccatcatg
tccgtccttcagctccttcacgagcaggtcggcgtggaaaaagtcgccgaaaaagtggtc
aagcccctggaagggctccgactcgctccctattatggctgcatcatgaacagaccgcct
gaagtcatgaacttcgacgactgtgagaaccccatcgccatggacgaactcatggccgcc
ctgggcgcagatgtggctcctttccccttgaaggttgaatgttgtggcgcatctttcggc
gttgcccgcaaggacatcgtcgccaagttgtccggcaaactgctggacgccgccgaagac
gtggaagcccacgcctttgtcactgcatgcccgctgtgtcagatgaacctggacctcaga
cagagccaggtcaattcgctcacaggcagcaagcacgacatgccggtattctactataca
cagctcatcggcaaggccctgggcctggatgccaagagcttgcagatggacaagctgtgc
gttccgccctccaaggcgtttcgtaaaatggaagaagcgcaacaggctaacgcctcataa
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