Polypterus senegalus (gray bichir): 120530764
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Entry
120530764 CDS
T08668
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120530764 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120530764 (bard1)
04121 Ubiquitin system [BR:
psex04121
]
120530764 (bard1)
03036 Chromosome and associated proteins [BR:
psex03036
]
120530764 (bard1)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120530764 (bard1)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120530764 (bard1)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
120530764 (bard1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120530764 (bard1)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120530764 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_4
Ank_3
Ank_5
BRCT_2
zf-RING_5
BRCT
zf-RING_10
zf-C3HC4
NIBRIN_BRCT_II
zf-C3HC4_4
Prok-RING_4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120530764
NCBI-ProteinID:
XP_039611268
LinkDB
All DBs
Position
6:6320687..6419972
Genome browser
AA seq
786 aa
AA seq
DB search
MLRVFSGNELFGLPMERRLEGDSGPKRWLKTRQAVQYFKSLLLCSKCGNMLQEPVCLGGC
DHIFCRSCTSESLREGCSVCHTPTWQKDIQINRQLNGVVQLCNQLENLLMLGCDKEADPV
MDENTPQSAVQPESREKPKKTVTIWYSPRTRKVRAKVEKAASKKNEVQQKEGQAAFSILQ
DTSVFEFPSSDSSTSQCAKVKKSAPRQKKKSLKKINKEWGFWQEGSNVKDSVNVESEVLE
PPSKKMVSFSSWEPSVCDSVSAPDTKGGKKATVDISSAEAKETLTSISKKTSLKDFSNTS
PRLERFIREIGLGNSDFCSPSVSHGAESVCPSDDTKPNEKSSSLLNCQVTKKPKKALPVS
PAFSSRVTRRRSSSTEKDSTELNTGQLSPKVLSSPNKDLLITSPSSRGLHQDTGSLQRSP
GNPGVFKRNHKGETPLHLAAIKGDALSAEQLLNNGADPNLKDHAGWTPLHEACHHGHFKV
VELLLQKGALLNTPGYQNDSPLHDAVKNGHTTIVELLLLHGASQDVVNLFGLKPIQYAEN
EDLRNILQTAPKRLSCPKALTHSDKLTVDQQKNEKLILASSGLSKRQQSQLSKLTTLIKA
GKAEQYNSCVTHIIIPDDHFPSAMTCMLGVLTGCWILKFQWVKASLETGKQAPEEMFEAA
DGPKRSRINRQQLLPGLFDGCYFYFLGPFKFPSKEDLIQLVKTGGGNILCRQPKPDSDVT
QTINTVAYHALPDSDQSFCTQYILYDSSYKYKPKQVHLGKVWSAPVSWLLCCITSFQLLP
VPELNS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgagttttttccggtaacgagctttttggcttgcccatggaacgacgacttgaa
ggtgatagtgggccgaagcgctggctgaaaacgagacaggctgtgcagtattttaagagt
ctcttattgtgctcaaaatgtgggaatatgctgcaggaacctgtatgcctaggaggatgt
gatcatatcttttgtaggtcttgcactagtgagagtttaagagaaggttgctccgtgtgt
cacacaccaacttggcaaaaagatatccagattaaccggcaactgaatggtgttgtgcaa
ctatgcaatcaacttgaaaatctgctgatgcttggctgtgataaggaagcagatcctgta
atggatgaaaatactccacaaagtgccgtgcagccagagtcgcgtgaaaaaccaaagaaa
accgttacaatttggtatagtcctcgcactcgcaaagtccgtgcaaaagttgaaaaggca
gctagcaagaaaaatgaggttcagcagaaagaaggacaagcagcattttccattttacaa
gacacatctgtgtttgaatttccttcttctgattcctcaacttctcagtgtgcaaaggtg
aagaagtctgcaccgagacaaaagaaaaaaagcttgaaaaaaattaataaggaatgggga
ttctggcaggagggatccaatgtaaaagacagtgtaaatgttgaaagtgaagtattggag
ccaccttctaagaaaatggtaagcttttcctcttgggaaccaagtgtttgtgactctgtt
tcagctccggatactaaaggtggcaaaaaggccacagtggatatttcttcagctgaagcc
aaagaaactttgaccagcatatcaaagaaaaccagtcttaaagatttctcgaatacatct
ccgagattagagcgcttcatacgtgagattggcctgggaaactctgacttctgttcccca
agtgtaagccacggtgcagaaagtgtttgtccttcagatgacaccaaacctaatgaaaag
tcaagttcattgttaaattgtcaagttacaaaaaaacccaagaaggcccttccagtgagt
cctgcattttcttcaagagtcaccagaagacggtcttccagtacagaaaaggatagcaca
gaattaaatacaggccagctttccccgaaagttctcagttctccaaataaagacttgtta
ataacatctccttcttcaaggggtcttcatcaagatactggcagtttgcagagatctcca
ggaaatccaggtgtttttaagagaaatcacaaaggggagactccacttcatcttgcagct
attaagggagatgctctgtcagcagagcaattactaaataatggtgctgacccaaacctc
aaagatcatgcaggatggacaccactgcatgaagcttgtcatcatggtcacttcaaggtt
gtcgagctgttacttcagaaaggggcacttttaaacactcctggttatcaaaatgattct
cctttgcatgatgcagtgaaaaatggacacactacaattgtggagctccttctactgcat
ggtgcctctcaggatgtagtaaacctctttggattgaaaccaattcagtatgcagagaat
gaagatctgagaaacatcctccaaactgctcccaagagactttcatgtccaaaggccttg
acacacagtgacaagcttacagttgaccaacaaaagaatgaaaaattaattcttgcaagc
agtgggctttccaaacggcagcagtctcagctcagcaagctgacaactcttatcaaagca
ggaaaggctgagcagtataacagctgtgtaactcacataattatcccagatgatcacttt
ccatcagctatgacgtgcatgctgggagtgctgactggatgctggatactaaaatttcag
tgggtcaaggcatcattagagacaggaaagcaagctccagaagaaatgtttgaagctgct
gatggtccaaaacgtagtcgaataaataggcagcagctactaccgggcctctttgatgga
tgctacttttattttttgggtccgtttaaatttccctcaaaagaggatttgattcaactg
gtgaaaactggtggaggcaacatactgtgtaggcaaccgaaaccagacagtgatgtgaca
cagaccatcaacactgttgcctaccacgcgttacccgactcggaccagtccttttgcacg
cagtatatcttgtatgacagcagttacaagtataagcccaagcaggtacacctaggaaag
gtgtggtcagctccagtgtcctggctcctctgctgcattaccagtttccaactcttgcct
gtgcctgaacttaacagttaa
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