Puntigrus tetrazona (Sumatra barb): 122350987
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Entry
122350987 CDS
T08985
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122350987 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122350987 (hdac6)
04131 Membrane trafficking [BR:
ptet04131
]
122350987 (hdac6)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122350987 (hdac6)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122350987 (hdac6)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122350987 (hdac6)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122350987 (hdac6)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122350987 (hdac6)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122350987 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
122350987
NCBI-ProteinID:
XP_043103723
LinkDB
All DBs
Position
8:complement(3851494..3864352)
Genome browser
AA seq
1084 aa
AA seq
DB search
MDPVPDSRGSTRSPRGTPETKRESNNPNHRKNLQEARRKGRMNRSKEEEEMSSELQNLDV
GGKTNTAGTGLVYVDAFTRFHCLWDASHPECPDRVSAVMEMLETEGLLGRCERVEARAVS
EDELLLVHTKEYVELMKSTRKMTEEELKALADKYDSVYLHPELFTSACLAVGSVLQLVDK
VMTSQLRNGFSINRPPGHHAHADKMNGYCMFNNLAIAARYAQKQHGVKRVLIVDWDVHHG
QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSLVGSGAGQGYNINLPWNKVGMEDG
DYVTAFQQLFLPVAYEFQPQLVLVAAGFDSVIGDPKGEMRVTPQCFSILTHMLKSVAQGR
LVLALEGGYNLRSTAEGVCASVRSLLGDPCPHLTSPGAPSKSALNSISKTISALYPFWKS
LQTFEGGLLSDVPSLPAPVCVELKASPPITGLVYDQRMMLHHNMWDGHHPELPQRISRIF
CRHGELGLVSRCLRIPARLATEEELALCHSSEHIGIIKSTEHMKPRDLHRLGNDYNSIYI
SNESYTCALMAAGSCFNSVQAMLTGQVRNGVAIVRPPGHHAEKDTACGFCFFNTAALAAR
YAQSITRESLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANFDKV
GQGKGRGYNVNIPWSGGKMGDPEYLAAFHHIVMPIAREFAPELVLVSAGFDAARGDPLGG
YQVTPEGYAHLTHQLMSLAAGRVLVILEGGYNLTSISESMCMCTSMLLGDSPPPLDHLPP
PKTTATVTINDVLRALAPFWSSLRIQIPESLRLALPSPKPKGKRASTGRGKKSPAQSPGQ
TPQHLEQSGLDELSKDLLSLNLNTSTASNPSPESVPIGGARRKVKPTPKNSDSDSPLKLK
LEKSRAGDDMHAEITAVKTKTPERRIPESVVTESSAAVDEQEGSVLEAAGGQATMMSVLE
SVFGAQASDLDTMYVVDPLPWCPHLESVRPVPAGGINVFLPCEECGGDAENWICLICYKV
LYGRYVNQHMVTHGQESGHPVVLSFADLSVWCYACESYIHNKVLHEAKNAAHIVKFGEEI
LPFN
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttccagattccagaggttctactcgatcaccaagaggaacgccagaaacc
aaaagagaaagcaacaatccaaaccataggaagaatctacaggaggcgcggaggaagggc
agaatgaataggagcaaagaggaggaggagatgagcagtgagctccaaaacctggacgtt
ggtggtaagactaatacagcaggaacaggtctcgtctacgtagatgcctttactcgcttt
cactgcctctgggatgccagtcacccagagtgtccagacagggtgagcgctgtgatggag
atgctggagacagaaggtctgttgggacgctgcgagcgagtagaggccagagccgtgtca
gaagacgagctgctactcgttcatacgaaggagtatgtagagctgatgaaatccactcgg
aaaatgaccgaagaggagctgaaggctctggctgataaatatgactccgtctacctgcat
cctgaattgttcacctccgcctgtctggcagtgggatcagttctccagctggtggataaa
gtgatgacgtcacagctgcgtaacggcttctccatcaacaggcctcctggtcaccatgct
catgcagataagatgaacggctactgtatgtttaataatctggccatagcagctcgctac
gctcagaaacaacatggagttaaacgagttttaattgtggattgggacgtgcatcacgga
cagggaatccagtatatttttgaagaggatcccagtgtgctgtatttctcagtgcacaga
tatgaagatggctcgttctggccacatcttaaggaatctgacagcagtttggtgggttca
ggagcaggacagggctacaatatcaacctaccctggaacaaggtagggatggaggatgga
gattacgtcacagctttccagcagctcttcctgcctgtggcgtatgagttccagcctcag
ctggtgttagtggctgctggatttgactctgtgatcggtgacccaaagggcgagatgaga
gtgacgccacagtgtttctccatcctgacccacatgctgaagagtgtagcacagggccga
cttgtgctggctcttgagggtggatataacctccggtccacagcagagggtgtttgtgct
agcgtgaggtcactgctgggtgacccttgccctcatctgacctctcctggtgctcctagt
aaaagtgctctgaactccatctcaaaaaccatctcagccttgtatccattttggaagagt
cttcagacatttgagggtggtcttctgtcagatgtcccttctctgcccgctccagtgtgt
gtagaattgaaggcttcccctccgatcactggactagtttacgaccagagaatgatgctt
catcacaacatgtgggacggtcatcatccagagctccctcagagaatttcacgaatcttt
tgccgacacggggagttgggtctggtctcccgttgccttcggatacctgctcgtctagca
acagaagaagagctggcactctgccacagttctgaacacataggcattataaagagtaca
gagcacatgaaaccccgagatctgcaccgactgggaaacgattacaactccatctacatt
agtaacgagagctacacctgtgccctaatggctgctgggtcgtgttttaactcggtacag
gccatgctcacaggccaggtgagaaacggtgtggccatagtccgtcctcccggtcatcac
gcagagaaagacacagcttgtggcttctgtttttttaatacggccgcgttggcggcgcgc
tatgcccagagcatcactcgcgagtccctgcgcgtcctcattcttgattgggatgttcat
catgggaatggcacacagcacatctttgaggaggatgacagtgttctatacatctctctg
catcgctatgaagacggggcattttttcccaattcggaggatgctaactttgataaggtg
gggcaagggaaaggcagaggatacaatgtcaacatcccctggagtggaggaaagatggga
gatccagaatacttagcggctttccatcacatagtaatgccgatagccagagagtttgcc
ccagagctggtgctggtgtctgctggttttgatgcagcgcggggtgatccgttaggaggg
tatcaggtgaccccagagggctacgcccacctcacccaccagttaatgagcctggctgca
ggaagagtgctggtcatactggagggaggatataaccttacctccatctctgagtcaatg
tgcatgtgcaccagtatgttgctgggagactctcctccgcctctagaccatctgccacct
ccaaagaccaccgccactgtcacgattaacgatgtcctgcgcgctctcgcccccttctgg
agctccctgagaatacagatcccagagtcacttcgtttggctttgccgtctcctaaaccg
aaaggcaagcgggcatcgacaggcaggggcaagaaatctcctgcccaaagtcccggacag
acacctcagcatctcgagcagtccggccttgatgagctcagtaaggacctgctgtctctg
aatctcaacacgagtaccgcgtcaaaccccagcccagaatcagtccccatcggaggagcc
aggcggaaggtgaagcccacccctaaaaactccgattcagattcacccctaaaactcaag
ttagagaaatccagagctggagacgacatgcacgcggagattacggctgtaaaaacaaag
acacctgagcggaggatcccggagtctgtggtcactgaaagttcagctgccgtggatgag
caggagggctcagtgctggaggctgctggtggtcaagctactatgatgtcagtcttagaa
agcgtgtttggagcacaagcctcagatttggacaccatgtatgtggtggacccgttgcca
tggtgcccacacttggagtcagtgcgaccggtgcctgcaggaggcatcaatgttttcctg
ccatgtgaagagtgtggaggtgacgcagaaaactggatctgtctcatctgctacaaggtg
ctctacgggcgttatgtgaaccagcacatggtgacccacgggcaggagtctggtcaccct
gtggtgctgagcttcgccgacctctctgtgtggtgctacgcctgtgagtcatacatccac
aacaaggtgctccatgaagccaaaaatgccgctcacatcgtgaagtttggagaagagatt
cttccttttaactaa
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