Pseudonaja textilis (eastern brown snake): 113445818
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Entry
113445818 CDS
T09005
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113445818 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113445818 (POLB)
Enzymes [BR:
ptex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113445818 (POLB)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
113445818 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
113445818 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH_3
Cdd1
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
113445818
NCBI-ProteinID:
XP_026570955
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQENPNQAITDLLSELANYEKNVNRAIHKYNAYRKAASVISKYPNKIKSGSEAK
KLDGVGTKIAEKIDEFLSTGKLRKIEKIRQDDTSSSINLLTRVSGIGPAAARKLVDEGIK
TLEDLRKNENKLNHHQRIGLKYFKDFEKRIPRKEMLEMQDVVLSEVKKVDPAYIATVCGS
FRRGAESSGDMDILLTHPDFTSESAKKPKLLHQVVEQLESVHFVTDTLSKGETKFMGVCR
LPSKDDEAACPYRRIDIRLIPKDQYYCGVLYFTGSDLFNKNMRAHALEMGFTLNEYTIRP
LGVTGVAGEPLPVDSEKDVFDYIQWPYREPKERSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcaaggccccgcaggagaaccccaaccaggccatcaccgacctcctcagc
gaattggcgaactacgaaaagaatgtgaatagagctattcataaatacaatgcttacagg
aaagcagcatctgtaatatccaagtaccctaacaagattaaaagtggatctgaagcaaag
aaattggatggcgtaggaactaaaattgctgaaaagatcgatgaatttttatctactgga
aaattacgtaagatagaaaagattcgacaagatgacacaagttcttctatcaatttattg
accagagttagtggcataggtcctgctgctgccaggaaactagtagatgaaggtattaaa
acattggaagacttaaggaaaaatgaaaataaattgaatcatcatcaacgcattggatta
aaatacttcaaagactttgaaaaaagaattcctaggaaggagatgcttgaaatgcaggac
gtcgtactgagcgaagtgaagaaagtagaccctgcctacatcgctacggtttgtggcagt
tttcgccgaggtgcagaatccagtggagatatggatatcctgctcacccacccagacttc
acttcagaatctgccaaaaagccaaagcttctgcatcaagtggtggagcagctggaaagc
gttcacttcgttacggacacgctctcaaagggggaaacaaaattcatgggcgtatgtcgg
ctcccaagtaaagacgacgaggctgcctgtccttacaggagaattgacatccggttgatc
cccaaggaccagtattactgtggagtcctctacttcaccggaagtgacctcttcaataag
aacatgcgagcccacgccctggaaatgggcttcaccctgaatgagtacaccatccggcct
ctgggcgtcactggcgttgcgggggagccactccctgtggacagcgagaaggacgtcttt
gactacatccagtggccatatcgggagcccaaagagcggagtgaatag
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