Phaeodactylum tricornutum: PHATRDRAFT_35869
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Entry
PHATRDRAFT_35869 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pti01009
]
PHATRDRAFT_35869
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_35869
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_35869
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_35869
Enzymes [BR:
pti01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PHATRDRAFT_35869
Protein phosphatases and associated proteins [BR:
pti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PHATRDRAFT_35869
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PHATRDRAFT_35869
Membrane trafficking [BR:
pti04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PHATRDRAFT_35869
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
PHATRDRAFT_35869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
7200864
NCBI-ProteinID:
XP_002180350
JGI:
35869
UniProt:
B7FZH2
LinkDB
All DBs
Position
8:complement(933837..935441)
Genome browser
AA seq
534 aa
AA seq
DB search
MSDLVVHRSDGAHGDHRRPPPVYLCYDERLLRHHPVHWQPPAVYPTQDDVRIKAFPAEYV
YENPERIRCVYEHLQSVFPPDTFLPLPCRLATRAEITAVHDEAHYDRLAATACMTAEELV
EQSQLDSDLYWNQETFAAARLACGGLLNCVDAVCRLNATPNTDATPPAIHAVALIRPPGH
HACQHREMGFCFLNSVAVAARYAIEQGHATKVLILDWDIHHGNGTQDLTYNDERILFVSM
HRYTGSNVAKHFFPATGKPTETGRNATNVNLAWTQGHMGDVEYAAAFSELVLPIVVAFQP
ELVLISCGLDAARGDLIGDNSVSPLGFRALTHSVVRAVGTHTTPVVVALEGGYSMDALPI
CMEHVVRGLSAANDTSLDWDVENLPQAWASDSLEYAHQALAMYWDSNRRVAADNQPAIQP
SAISNINQTVTALQKCSSRWNECGLTKLLKPPGPSAVSTRASRRLVKSSPNTFLPNGSNA
TPQPKASKVLAVSLAKDPVKETSLPAAKADENVDGGDGDALIAALQLLSLSNGK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctcgtggtgcatcggtcggacggtgcccacggggatcatcgtcgccctcct
cccgtatatctctgctacgacgaacgattactccgtcaccatccggtacattggcaacct
cccgcagtctatccaacacaagacgacgtacggataaaagcgtttccagccgagtacgtc
tacgaaaaccccgaacgcatccgttgcgtctacgaacatttgcaaagcgtctttccgccc
gacacctttctgccgctcccgtgccgtctagccacacgtgccgaaatcaccgccgtccac
gacgaggcgcactacgatcgtctcgccgcaacagcctgtatgactgcggaagaactcgtc
gaacaaagccagctcgacagtgatttgtactggaaccaggagacctttgctgccgcacgc
ttggcttgtggcggcctgttgaattgtgtcgacgccgtgtgccgattaaacgcgactccc
aacaccgacgcgacaccaccggcaattcacgccgtggccttgattcggcctccgggacat
cacgcttgtcaacatcgcgaaatgggcttttgctttttgaattccgtcgccgtggccgcg
cggtacgcgattgagcaaggccacgccaccaaagttctcattctcgattgggacatacac
cacggtaacggcacacaagatctcacctataacgacgaacgtatactcttcgtgtcaatg
caccgctacacgggcagcaacgtcgccaagcatttctttcccgccaccggaaaacccacc
gagaccggacggaacgccaccaacgtcaacctggcctggacgcaaggacacatgggtgac
gtggaatacgccgccgccttctcggaactcgtgttgcccatcgttgtcgccttccaaccc
gaattggtgttgatttcctgtggactggatgccgctcggggagatttgattggggacaat
tccgtgtcaccactggggtttcgggccttgacgcacagtgttgtccgcgccgtaggcacc
cacaccacacccgtggtagttgccctggaaggcggctacagtatggacgctttacccatt
tgtatggaacacgtcgtcaggggactatcggccgccaacgacaccagtttagactgggac
gtggagaatcttccacaggcatgggcgagtgatagcttggagtacgctcaccaagctttg
gcaatgtactgggactccaaccgtcgagtagcggccgacaaccagcccgcgatacaacct
tcggcaatcagtaatatcaatcaaaccgttacagccttgcaaaagtgttcctcacgctgg
aacgaatgtggtttaacgaaactcctaaagccaccggggccgtctgcagtctcgactcgc
gcgtcacggcgtttggtaaagtcctctcccaacacttttctaccaaatgggtcgaatgcc
acaccgcagccaaaagcctccaaggttctggctgtatcgttggcgaaggatcccgtcaag
gaaacatcgctccccgctgccaaagcggacgagaacgtcgacggtggggatggtgatgcg
ttgattgcggctttgcagttgctgtccttgtccaatggcaagtag
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