Pistacia vera (pistachio): 116135403
Help
Entry
116135403 CDS
T07386
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116135403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116135403
04121 Ubiquitin system [BR:
pvy04121
]
116135403
03036 Chromosome and associated proteins [BR:
pvy03036
]
116135403
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116135403
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116135403
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
116135403
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116135403
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
116135403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
BRCT
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
BRCT_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_6
Prok-RING_4
RTT107_BRCT_5
PTCB-BRCT
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116135403
NCBI-ProteinID:
XP_031276966
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MAESTKAGRRALNPWVLHVQKLGLELKCPLCLNLFNRPLLLPCDHVFCNSCMPRLARFGL
ECPLCKFECREADLRPLHFVESIVTIFKGLDAFSGANLNHSLSSVAGRVLDQCPSQEYNS
SDQSVSANMLGQVTYNHDVGGSKSKGFEMLGKGPILCYNGQGPVSSQPSTWIQSEGIQEC
GAGKIDMNRVEQTLLGSPPSFDNIKGSDNESSDQGSEHSPETYPANRPIKKSFSTTLEHG
FSASEIEGHLRDPKRQKKLNYSCKDMGVKNAGNIQSMVLPSESMVASTTELEPKSGGPLV
GATLPTISDGSHAIKFICGFCQSSRISEATGSMLHYANGKQVMGDAAACSNVIHVHSKCV
DWAPQVYYDGETIKNLKAELARGSKLKCTACGKKGAALGCYMKSCRRSYHFPCALEIPKC
RWDDEDFLLLCPVHSSVKFPNEKSGNCVVKNDPALQITPQQCNFWAASPDKAKKWVLCGS
ALSTDEKILLVRFGSMVGVTVSKFWRPDVTHVIAATDEKGACTRTLKVLMAIVNGCWVLK
IDWIKACMEALHPVYEEPYEISLDNHGCQDGPRTGRLTLLEKASKLFDGLSFYFAGDFIS
GFKEDLHSLVIGAGGFVWKSEVELLAQAKDDNGACSKILIVYNLDSPQGCQLGEEVSIIW
KRLNEAEELANKVGSQVIGHTWLLESIAAHKLWPLVS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtctactaaggcgggccgccgagccttaaatccgtgggtacttcacgttcag
aagcttggtctcgaactcaaatgccctctctgcttaaacctatttaatagaccattgttg
ctgccttgtgatcacgtattttgcaattcatgtatgcccagattagcacggtttggttta
gagtgccctttatgtaaatttgaatgtcgtgaagcagatttaaggcctttgcattttgtg
gaaagtatagtgacaatctttaaaggattagatgctttttctggggccaatctgaatcat
tctctttcttctgttgctgggagggttttggaccaatgcccgtctcaagagtataattca
agtgaccaatctgtgtcagcaaatatgctgggtcaagttacatataatcatgacgttgga
ggtagcaaaagtaaaggatttgagatgcttggtaagggaccaattttatgttataatggt
caaggtcctgtatcatcacagccaagtacctggatacagagtgaaggcattcaagagtgt
ggagctgggaaaattgatatgaatcgtgtggaacagacattgcttggcagtcctccttca
tttgataatattaagggttcagacaatgaaagtagtgaccagggaagtgagcatagtcct
gaaacttatccagccaataggccaatcaagaaaagttttagtacaacactggaacatggg
ttttctgcttctgaaattgaaggtcatttgagggaccccaagagacaaaagaaattgaac
tacagttgcaaggatatgggtgtgaaaaatgctggtaatattcaatcaatggttttgcca
agtgaaagcatggtggcttcaactactgaattggaacctaaatctggaggacccctcgtg
ggtgcaacactgcctacaatttcagatggctctcatgcaattaaatttatttgtggattt
tgccagtccagtagaatctcagaggcaactggctccatgttgcattatgctaatgggaag
caagtaatgggagatgcagcagcctgttctaatgttattcatgttcatagtaaatgcgtt
gactgggcaccacaagtatattatgatggcgagacaattaagaatctgaaagcagaattg
gcaaggggttcgaagctcaaatgcactgcttgtgggaaaaagggtgcagcactaggctgc
tacatgaaatcttgtcggagaagttatcattttccctgtgctctggaaattcccaaatgt
cgatgggatgatgaagactttcttctgctctgtccagtgcactcttcagtcaaatttcca
aatgagaagtctggaaactgtgttgtaaagaatgatcctgcattgcaaataaccccacag
cagtgtaacttttgggctgcctcacctgacaaagcgaaaaaatgggttttatgtggatct
gctttgtctactgatgaaaagattcttttggtcaggtttgggagcatggttggtgtaact
gtgtccaagttctggaggccagatgtcacacatgtgattgcagccacagatgaaaagggt
gcatgcacaaggacattgaaagttctcatggccattgtgaatggttgttgggttcttaag
atcgactggataaaagcttgcatggaagccttgcatcctgtatatgaagagccttatgaa
attagtcttgacaatcatggatgtcaagatggcccaagaactggcagacttacgctgttg
gaaaaggcatcaaagctctttgatggcttaagtttctattttgctggtgacttcatttcg
ggttttaaggaagatcttcatagtttggttattggtgcgggaggatttgtttggaagagt
gaggtagaattgctggcacaagcaaaagatgacaatggagcttgttctaagatactaatt
gtttataaccttgattccccacaaggatgccaattaggagaagaggtttcaataatttgg
aagagactaaacgaagcagaggaattggctaacaaagttggttcccaggtgattggtcac
acatggcttttggaatcaattgctgcacataagttgtggcctcttgtcagctaa
DBGET
integrated database retrieval system
