Pyrus x bretschneideri (Chinese white pear): 103928739
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Entry
103928739 CDS
T03446
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103928739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103928739
04121 Ubiquitin system [BR:
pxb04121
]
103928739
03036 Chromosome and associated proteins [BR:
pxb03036
]
103928739
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103928739
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103928739
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
103928739
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103928739
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103928739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
PTCB-BRCT
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_6
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
103928739
NCBI-ProteinID:
XP_009336095
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MVGCMKVFSLQLSQSFRSSVSMVDAIPNRKCSDSSSTRSMMNPWVLHFQKLGLELKCPLC
LNLLNRPTLLPCDHIFCNCCIPSSSCPVCKAQVADRDLRPVPFMENIVAIYKSLDASFCA
NLFQPVSSDVRTILEQNPVLPNISFAGKMTIEPFDNDQGGNSNSGQSIYSSSAHERVCAP
CSLNRSVADGVGNNDKVDKCSMPIDANGKVLDFARSGVGNPNSQLPSSQIRAGGLDECMT
VERDMNHAAQSLPNSPPSFGDAKCSDNDSCGRRCEQISENSLVRRSISKIDDGRVGQKRH
DSCATEIDGHLRKKIKYEPVLETYSELEHKFSTPPNESFTKRTICVFCQSSTISEGTGPM
LHYSKERLVEGDEANASNVIHVHRICIDWAPQVYFEGENVKGLKAEVSRGAKLKCTKCGL
KGAALGCFVKSCRRSYHVTCATEISKCRWDKENFLLLCPAHRSTKFPGEKSNYGKPKICP
PSNSLGAPNEMNQWIICPSGLSSEEKLLFNKFAKKTGATVSKTWRPNVTHLIAAVDGDGA
YVRTFKTCMAILAGRWILKIDWVKACMEATDHVNEEPYEVSLDNYGCCDGPKTGRLRATN
NYPKLFNGLSFYFAGDFVLDRKEDLQDLIIVAGGTVFNSSEEVMERSCLEHTASRTLVVY
NLDPPEGCKLGEEVSILWQRSNEAQDIAAKIGSQIIGHTWLLESIARCELQPFVC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggttggatgcatgaaagtgttctccctgcaactctctcagagtttccgaagctccgtt
tcaatggtggatgcaatccctaaccgaaaatgcagcgacagtagcagtaccaggtcgatg
atgaacccgtgggttctccatttccagaaactgggtctcgagctcaagtgccccctctgc
ttgaatttgcttaatcgaccgacgttgcttccatgcgatcacattttctgcaattgctgc
atacccagttcgagttgcccggtttgtaaagctcaggttgcggaccgagatctcaggcct
gtgccattcatggaaaacatagtagcgatctacaaaagcttggatgcgtctttctgtgcc
aatttgttccagcctgtttcttccgatgttagaaccattctggagcaaaaccctgttttg
cctaatatcagttttgctgggaaaatgactatagaaccatttgacaatgaccaaggaggt
aattcaaacagtgggcaatccatctattcatcgagtgctcatgaacgagtttgcgctcct
tgtagtttgaatcgttctgtagctgatggagttggcaacaatgacaaagtagataagtgt
agcatgccaatagatgctaatggcaaggtattagattttgctagaagcggagtgggaaac
cccaattcacaactaccaagttctcaaataagagctggtggacttgacgagtgcatgact
gtagagagagacatgaatcacgcagcacagtcattgcccaacagtcctccttcatttggt
gatgccaaatgttcagataatgatagctgtggtcggcgctgtgagcaaatttcagaaaat
tctttggtcaggagatcgatcagcaaaattgatgatggtagagtagggcagaaaagacat
gatagttgtgcaactgaaattgatggtcatttaagaaagaaaataaagtatgagccagtt
ttagagacttattctgagcttgaacataagttcagtacaccacctaatgaatcattcaca
aagagaacaatttgtgtattttgtcagtcttctacgatctcggagggtacagggccaatg
ttgcattattctaaagagagactggtagagggagatgaggcaaatgcttcaaatgtcata
catgttcacagaatatgcattgattgggcaccgcaagtgtatttcgaaggtgaaaatgtt
aagggattgaaggcagaagtctcaaggggtgcaaaactaaaatgcaccaaatgtgggcta
aagggagcagctttgggatgctttgtaaagtcctgccgaagaagctatcatgttacctgt
gcaactgaaatttctaaatgtcgttgggacaaggaaaactttctgctgctatgtccagct
catcgttcaactaaatttcctggtgagaagtcaaattatgggaagcccaaaatctgtccc
ccgtccaacagtttgggagctccaaatgaaatgaatcaatggatcatatgcccatccggt
ttgtcttctgaagaaaagcttcttttcaacaagtttgccaagaagactggcgcaactgtg
tccaagacctggagaccaaatgttacacatttgattgcagccgtggatggggatggtgca
tatgtcaggacattcaaaacttgcatggccattttggctggaagatggattctgaaaatt
gactgggtgaaagcatgcatggaagccacagatcatgtgaatgaagaaccgtatgaagtt
agtcttgataactatggatgctgtgatggcccaaaaactggcaggcttcgggcaacaaac
aattatccgaaactctttaatggtttgagtttctattttgctggtgattttgtactggat
agaaaggaagatcttcaagatttgatcattgtagcaggaggcactgttttcaacagctca
gaagaagtgatggaacgaagttgtcttgaacatacagcttcaaggacactagttgtatac
aacctcgacccaccagaaggttgcaagttgggggaagaagtttcaatcctttggcaacgg
tcaaatgaggcccaggatatagctgcaaaaattggatcacaaatcatcggtcacacatgg
ctcttggaatcaattgcaagatgcgagttacagccttttgtctgttga
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integrated database retrieval system
