Quillaja saponaria (soapbark tree): O6P43_006866
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Entry
O6P43_006866 CDS
T09778
Name
(GenBank) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O6P43_006866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qsa03019
]
O6P43_006866
04121 Ubiquitin system [BR:
qsa04121
]
O6P43_006866
03036 Chromosome and associated proteins [BR:
qsa03036
]
O6P43_006866
03400 DNA repair and recombination proteins [BR:
qsa03400
]
O6P43_006866
Messenger RNA biogenesis [BR:
qsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
O6P43_006866
Ubiquitin system [BR:
qsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
O6P43_006866
Chromosome and associated proteins [BR:
qsa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
O6P43_006866
DNA repair and recombination proteins [BR:
qsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
O6P43_006866
BRITE hierarchy
Motif
Pfam:
zf-HC5HC2H
BRCT
zf-RING_UBOX
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_6
zf-RING_2
Prok-RING_4
RTT107_BRCT_5
zf-RING_10
BRCT_2
zf-Nse
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
KAJ7977203
LinkDB
All DBs
Position
3
Genome browser
AA seq
584 aa
AA seq
DB search
MGFPAKCGNSKLLNPWVLQFQKMGLELKCPLCLNLFQKPMLLPCDHIFCNSCITISTISG
AECAICKSQFAHQDPRAAPFIENIVTVYRSLVATFSDSLLQQASSDAERVSERRQASLGS
NFNANLSKELFQSTQGDDNLHCGKSIFSFSANKQVHVPFSLHRYIEDGIVQNGKNEKCNI
SIDGKAGEFEMSCERGFDLEGASKTNAVMLRSRLEVGQHKKSEIMEIDMNQVTQLSPGSP
PFRDSRGSDSECSNRDSEHRMENSFKGGIKEKGVSKEREIHLRRDTSASESEDSSSPVAS
NSELEHKFGVNPGARLPTVSDGSYANKSICSFCQSSKSSEDTGPILHYANGALVVGDAAT
QPNVIHVHKICIDWAPQVYFVDDVVKNLKAEVARGSKLKCSRCGLKGAALGCYVTSCRRT
YHVPCAMEISGCFWDYDNFLMLCPAHSHVKLPNEKSKSECHNSKNHSTSTQLISKQLSHW
VAPADGVKKWVFCGSALSSEEKILLVKFGGRTGVTVTKFWTPDVTHVIAATDSNGACSRT
LKVLMAILHGRWVLKIEWIKACIEAMHPVEEEPYEVSLDNYGCL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggggtttcctgcgaagtgtggtaacagtaaacttctaaatccatgggtgcttcagttt
cagaaaatgggtctcgagctcaaatgccctctctgcctaaacttgtttcaaaagccgatg
ttactcccgtgcgatcacatattctgcaattcctgcataactatttcgacaatttctgga
gcagaatgtgctatctgtaaaagtcaatttgctcatcaagatccaagggcagcgcctttc
atagaaaatatagtgacagtctacagaagcttggttgccactttttctgacagtctttta
cagcaagcttcttctgatgctgagagggtttcagagcgacgtcaagcatcacttggttca
aattttaatgctaacttgagcaaggaactgtttcaaagtacccaaggggatgataatctt
cactgtgggaagtctattttctcattttcggctaacaaacaagtccatgttcctttcagt
ctacatcgttacattgaagatgggatagttcagaatggaaaaaatgagaaatgcaatata
tccatagatggaaaggctggagaatttgagatgtcttgtgagagaggatttgatttggaa
ggtgccagtaagactaatgcagtaatgctacgttcacgattggaagtggggcagcacaaa
aagagtgagattatggaaatagacatgaaccaagtgacacaattatcacctggaagtcct
ccatttcgtgatagcagaggttcagatagtgagtgcagcaatcgagacagtgagcataga
atggaaaattcattcaagggagggattaaagagaagggggtttcaaaagaaagagagata
cacttgagacgtgatacttctgcctccgaatctgaagattctagtagtcctgtggcttcc
aattctgaattggaacataagtttggggtgaatcctggtgcacgtttgcctacagtttca
gatggttcatatgcaaataaaagcatttgttcattttgtcagtcttctaaatcctccgag
gataccgggccaattttgcattatgccaatggggctttggtagttggagatgcagcaacc
caaccaaatgtcatacatgttcacaaaatttgcatcgattgggcgccacaagtgtacttt
gttgatgatgttgttaagaatttgaaggcagaagtagcacggggttcaaaacttaaatgc
agcagatgtggattaaagggagcagctctgggctgctatgtgacttcctgtagaagaact
tatcatgttccttgtgcaatggaaatctctggttgtttttgggactatgacaactttctt
atgctctgtccagctcattctcatgtcaagcttccaaatgagaaatccaagtctgaatgc
cataactccaagaatcattccacgtccactcaactgatttctaagcagttaagccattgg
gtagccccagctgatggagtcaaaaaatgggttttctgtggatctgccctgtcctctgaa
gaaaagatacttttagtcaagtttggaggcaggactggtgtaactgtgactaagttctgg
acacccgacgtcacacatgtcattgcagcaactgattcaaatggagcatgctccaggaca
ctgaaagttctcatggccattttacatggaagatgggttcttaaaattgagtggataaaa
gcatgcatagaagcgatgcaccctgtggaggaagaaccttatgaagttagtcttgacaac
tatgggtgcctgtaa
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