Rousettus aegyptiacus (Egyptian rousette): 107515022
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Entry
107515022 CDS
T06036
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray04613
Neutrophil extracellular trap formation
ray05014
Amyotrophic lateral sclerosis
ray05034
Alcoholism
ray05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
107515022 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
107515022 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107515022 (HDAC6)
09165 Substance dependence
05034 Alcoholism
107515022 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ray01009
]
107515022 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107515022 (HDAC6)
04131 Membrane trafficking [BR:
ray04131
]
107515022 (HDAC6)
03036 Chromosome and associated proteins [BR:
ray03036
]
107515022 (HDAC6)
Enzymes [BR:
ray01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107515022 (HDAC6)
Protein phosphatases and associated proteins [BR:
ray01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107515022 (HDAC6)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107515022 (HDAC6)
Membrane trafficking [BR:
ray04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107515022 (HDAC6)
Chromosome and associated proteins [BR:
ray03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107515022 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
107515022
NCBI-ProteinID:
XP_016008818
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MGSGRGCEELKDLGMRLRANSIRGEVSPTMTSTGQDSTTTRQRRSRHNPHSTPHDSNSNV
TLKRGTKKGATHHSSPKLAEVKKKGRMKKLSQATGQDLIMGLQGLDLNLEAKTLSGTGLV
FDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCISFQARFAEKEELMLVHSLEY
IDLMETTQYMNEGELRILADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGSEIRNGMAI
IRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHGIQRVLIVDWDVHHGQGTQFTFDQDPS
VLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLQVLLP
VALEFHPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGRLILSLEGGYNLR
SLAEGVSASLHTLLGDPCPMLESPGAPCPSAQSSLSCALEALEPFWEVLVRSGETLEEDN
VERDNAEEEEEEEPWQPPELPVLTWPVLQARTGLVYDQQMMGHYNLWDNHHPEMPQRVSQ
IMCRLEELGLSRRCLTLPARPATDAELLTCHSAEYVHRLRATEKMKPRELHRESANFDSI
YICPSTFACAKLAAGSTCCLVEAVLAGEVLNGVAVVRPPGHHAEQDAACGFCFFNSVAVA
ARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSILYISLHRYDHGTFFPMGDEGASN
QVGWAAGMGFTVNVAWNGPRMGDAEYLAAWHRVVLPIAYEFNPELVLVSAGFDAARGDPL
GGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRTLLGDPPPLLTLP
RPPLSGALASIAKTIQIHRKYWRSLRVTKFEDKEGPSSSKSIKEAPQPANPGLAEKLTTL
EGNILDATMEKDTSASSAQESTPAQNKSQTAVVELTQDQPSEAAKGEPMLDQTTSKAATL
DQTTSEEAVEIAKLIHTPPAPCSNNQTPPTSPVQGATAQISLSKLIGNLRTLELDSKAQE
APESQIPEEERLLGEAAGGQDMDNSVLMQAFGNTDQVMFYAVTPLPWCPHLVAVCPIPEA
GLDVTQPCQDCGALQENWVCLSCYEVYCGRYISAHMLQHYEGSGHPMVLSYVDLSTWCYQ
CQAYVHHQALLDVKNVAHQNKFGEDMPHSH
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgggcgaggctgtgaggaattaaaggatctgggaatgaggcttagagcgaac
agcatcaggggtgaagtctccccgaccatgacctctactggccaggattccaccacaacc
aggcagcgaaggagtaggcacaacccccactcgaccccccacgactccaactccaacgtc
accttgaagcgaggtactaagaagggtgccacacaccactccagccccaaactagcagaa
gttaagaagaaaggcagaatgaagaagctcagccaggcaacagggcaagacctaatcatg
gggctgcaagggctggatctgaaccttgaggccaagacactgtctggtactggcttggtg
ttcgatgagcagctcaatgaattccactgcctctgggatgacagcttccctgaaggccct
gagcggctccatgccatcaaggagcagctgattcaggagggcctcctggaccgctgcata
tcctttcaggcccggtttgctgaaaaggaggagctgatgctggttcatagcctagaatac
attgatctgatggagacaacccaatacatgaatgagggagaactccgtatcctagcagac
acctatgactcagtttatctgcatccgaactcatactcctgcgcctgcctggcttcaggc
tctgtccttaggctagtggatgcagtcctggggtcagagatccggaatggcatggccatc
atcaggcctcctggacaccacgcccagcacagtcttatggatgggtattgcatgttcaac
catgtggccgtggctgcccgctacgctcaacagaagcatggcattcagagggtccttatc
gtggattgggatgtgcaccatggtcaaggaacacagttcacctttgaccaagaccccagt
gtactctatttctccatccaccgctacgagcagggtcggttctggccccacctgaaggcc
tctaactggtccaccacaggttttggccaaggacaaggatataccatcaatgtgccttgg
aaccaggtggggatgcgagatgccgactacattgctgcgttcctgcaagtcctactgcca
gtcgcccttgagttccacccccagctggtcctggtggccgctggatttgatgcccttcaa
ggggaccccaagggtgagatggctgccactccggcagggtttgcccagctaacccatctg
ctcatgggtctggcaggaggcagactgatcctgtctctggagggtggctacaacctccgc
tccctggctgagggcgtcagtgcctcacttcacaccctcctgggagacccttgccccatg
ctggagtcccctggtgccccctgcccaagtgcccagtcttcactgtcctgtgctctggaa
gccctggagcccttctgggaagtccttgtgagatcaggtgagaccctggaggaggacaac
gtggagagggacaatgcagaagaagaggaagaagaggaaccatggcagccccctgagctc
ccagtcctgacgtggccagtgctgcaggctcgcacagggctggtctacgaccaacagatg
atgggtcactacaacttgtgggataaccaccaccctgaaatgcctcagcgcgtctcacag
atcatgtgccgtctggaggagctgggcctttctaggcgctgcctcaccctgcctgcacgt
cctgccacagacgctgagctgcttacctgccacagtgctgagtatgtgcatcgtctgcgg
gccacagagaagatgaaaccccgggagctgcaccgtgagagtgccaactttgactccatc
tacatatgccccagcaccttcgcctgcgcaaagctggctgctggctccacatgctgcctt
gtggaggctgtgctggcgggagaggttttgaatggtgttgctgtggtgcgtcctccggga
caccatgcagaacaggatgctgcttgcggtttctgctttttcaattctgtggctgtggct
gctcgccatgcccaggccatcagtgggcatgctctacggattttgattgtggattgggac
gttcatcacggtaatggaactcagcacatatttgaggaggaccccagcatactctacatt
tccctgcaccgctatgatcatggcaccttctttcccatgggggatgagggtgccagcaac
caggtgggctgggccgcgggcatgggcttcactgtcaatgtggcctggaatgggccccgc
atgggtgacgctgagtacctggctgcttggcatcgtgtggtgcttcccattgcctacgag
tttaacccagaactggtgctagtctcagctggctttgacgcagcacggggggacccgttg
gggggctgccaggtatcacctgagggctatgcccatctcacccacctgctgatgggcctt
gccagtggccgcattatcctaatcctagagggtggctataacctgacatccatctcggag
tccatggctgcctgcacccgtaccctccttggggacccgccacccctgctgaccctgcca
cggcccccactatctggggccctggcctcgattgctaagaccatccaaatccatcgcaaa
tactggcgcagcttacgggtcacaaagttcgaagacaaggagggaccctccagttctaag
tcaatcaaggaagcaccccaaccagcaaatcctgggttagctgagaagctgaccacacta
gaagggaacattctggatgcaaccatggaaaaggacacctcagcatcatctgctcaagag
tctactccagcccagaataagtcacagacggctgtggtagagctcacgcaggaccaaccc
tcagaggcagccaagggggaacccatgctggaccagaccacctcaaaggcagcgacactg
gaccagaccacctcagaggaggctgtggaaattgctaagctgatccacacccctccagcc
ccatgcagtaacaaccagactcctccaacctcacctgtgcaaggagccacagcccagata
tccctaagtaagctgattggaaatctcaggaccttggaactagacagcaaggcgcaggag
gccccagagtctcagatcccagaagaggagaggctacttggagaagcagctggaggtcag
gacatggataattcagtgctgatgcaggcctttgggaacactgaccaggtcatgttttat
gctgtgacaccactgccttggtgtccccatttggtggcagtatgccccattcctgaagca
ggcctggatgtgacccagccttgccaggactgtggagcactccaggagaactgggtgtgt
ctgtcttgctatgaggtctactgtggtcgttacatcagtgcccatatgctgcagcactat
gaaggctcaggacacccaatggtcctcagctacgttgacctttctacctggtgttaccaa
tgtcaggcctatgtccaccatcaggctctcctagatgtgaagaacgtcgcccaccaaaac
aagtttggggaggacatgccccactcacactaa
DBGET
integrated database retrieval system
