Ricinus communis (castor bean): 8266494
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Entry
8266494 CDS
T01087
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X2
KO
K10683
BRCA1-associated RING domain protein 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8266494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8266494
04121 Ubiquitin system [BR:
rcu04121
]
8266494
03036 Chromosome and associated proteins [BR:
rcu03036
]
8266494
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8266494
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
8266494
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
8266494
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
8266494
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
8266494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
RTT107_BRCT_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
8266494
NCBI-ProteinID:
XP_002526570
UniProt:
B9SKQ1
LinkDB
All DBs
Position
7:23823013..23828781
Genome browser
AA seq
744 aa
AA seq
DB search
MADSMKHNSVIRSMNPWVLHLQKLGLELKCPLCLNFLKRPFLLPCDHIFCNSCLHERTKF
ASECPVCKAQYVGRDLRPLPFIENMVAIYRSLDSAFCANMFQSSCSDTGKISEQCPTSAG
ADCNDKLSKESIGQEDNSSSGRSMYLLKGNQLAQVPLNSSQNGARNIDMADKSNVQRVTK
DGEYEIVGGDAKQNINSTPISSQVRAGRLQECGLLRISTNQSDQLSTGSPPSFGDVKSPE
NDSCDQGDDSPTNYQAIRLVKRSPDDMTSQERHDGFASGTEGGNLRDPKRHKKLDYGQLN
RDTNRSSPISSQTENPGACCSQLGHKFVPPHIDGQPPALLEDSSVAKIMCGFCQSSRTSK
DTGPMLHYVNGKLVEGDEASGSNALHVHRICIEWAPQVYFVDETVKNLKAELARGSKLKC
SKCGLKGAALGCFQKSCRRSYHVTCAMEIAGCRWDYDNFLVLCPSHSSVRFPDEKKSKSK
KHSLECHHVPTQVPPQQPNFWAESATGAKEWVFCGSALSSEEKSLLIEFGRMIGVPVTKF
WQPNVTHVIAATDTKGACTRTLKVLMAILNGRWVLTIDWVKACMRSMHYVDEEPYEVSLD
NHGCHSGPRTGRLSVLDNAPKLFSGLNFYFAGDFVSGYKEDLQNLVLAAGGTILDSKEKV
VEQSHNEATPSRTLVVYNFDPPLGCKLGEEVTILWQRLSEAEDLAAKIGSQVIAHTWLLE
SIASYKFQPFVSLNSTHDDNNLLA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcaatgaaacataatagtgttattaggtcaatgaatccgtgggttcttcat
cttcaaaaactgggtcttgaactgaaatgtcctctctgtttgaactttctaaagcgacca
tttttgcttccttgtgatcacattttctgcaattcatgtttacatgaaaggacaaagttt
gcttctgagtgtcctgtttgtaaagctcaatatgttgggcgagatttgaggcccttgcct
ttcattgaaaacatggtggcaatctatagaagtttggattctgctttctgtgccaatatg
tttcagtccagctgctctgatactgggaaaatttcagagcaatgcccaacttcagcaggt
gcagattgcaatgataaattgagtaaggaatcaattggtcaggaagacaattcaagcagt
ggaaggtccatgtatttgctaaaaggcaatcagttagctcaggttccattgaattcttct
caaaatggggctcgaaacattgacatggcagacaaatccaatgtgcaaagagtaactaaa
gacggagaatatgagatagttggtggtgatgctaaacaaaatatcaattctacacctata
agttcccaggtgagagctggtaggctccaagagtgtgggcttttgagaataagtacaaat
cagtctgatcaattgtcaactggcagtcctccttcatttggtgatgttaaaagtccagaa
aatgacagctgtgatcagggtgatgatagtccaacaaattatcaagcaatacgactggtc
aagcgaagtcctgatgacatgacaagtcaggaaaggcatgatggttttgcctctggaact
gaaggaggcaatttaagagacccaaagagacataagaagttggactatggacaattaaat
cgagacacaaataggagcagcccaattagctctcaaactgaaaatccgggggcctgttgt
tctcaattaggacataagtttgtgccacctcatattgatggacagcctcctgcattgtta
gaagactcatctgtggcaaaaattatgtgtggattttgtcagtcctccagaacatcaaag
gacacgggtccaatgctccactatgtcaatgggaagttggtagagggagatgaggcatct
ggatccaatgccctacatgttcacaggatatgtattgaatgggctccgcaagtgtatttt
gttgatgaaactgttaagaatctgaaggcagaattggctaggggttcgaagttaaagtgc
agcaaatgtgggcttaagggagcagctctaggctgctttcagaaatcttgccgtagaagc
taccatgttacctgtgcgatggaaattgctgggtgcagatgggattatgataacttcctt
gtgctttgtccatcccattcttcagtcagatttccagacgagaagaaatccaagtctaag
aagcacagcttagaatgtcatcacgtgccaactcaagtacccccacaacagcctaacttt
tgggcagaatcagccactggagcgaaggaatgggtattttgtggatctgctctatcttct
gaggaaaagtctcttttgattgagtttgggcgcatgattggtgtgcctgtgactaaattc
tggcaaccaaatgtcacacatgttattgctgccacagatacaaagggggcatgtaccagg
acactgaaagttctaatggccattttgaacggaagatgggttcttacaattgactgggtg
aaggcatgcatgagatctatgcattatgtggatgaagaaccttatgaagtcagtcttgat
aaccatggatgccatagtggccccagaactggcaggctcagtgtgttggataatgcgccg
aagctctttagcggcttaaatttctatttcgctggtgactttgtctcgggttacaaggaa
gatctccagaatttggtccttgctgccggaggtactattttggatagcaaggaaaaagta
gtggagcaaagtcataacgaggcgacaccttcaagaacattagttgtctataactttgat
cctccactgggatgcaagttaggagaagaagttacaattctctggcagagactaagtgaa
gcagaagatctagctgctaaaattggatcccaggtcattgcccatacatggctattagag
tctattgcttcctataagttccaaccttttgtcagcttaaatagtactcatgatgacaat
aacttgttagcataa
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