KEGG   Rattus norvegicus (rat): 309902
Entry
309902            CDS       T01003                                 
Symbol
Tet1
Name
(RefSeq) methylcytosine dioxygenase TET1 isoform X1
  KO
K13097  methylcytosine dioxygenase [EC:1.14.11.80]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    309902 (Tet1)
   03041 Spliceosome [BR:rno03041]
    309902 (Tet1)
Enzymes [BR:rno01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     309902 (Tet1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    309902 (Tet1)
Spliceosome [BR:rno03041]
 Complex A
  Other components
   Complex A specific factors
    309902 (Tet1)
SSDB
Motif
Pfam: Tet_JBP zf-CXXC
Other DBs
NCBI-GeneID: 309902
NCBI-ProteinID: XP_038955252
RGD: 1310993
Ensembl: ENSRNOG00000000277
LinkDB
Position
20:25766806..25839598
AA seq 2058 aa
MSRSRPTKPSKSVKTKLQKKSSQMKKKISKQAVKHGASGKALTPGKLKQLIRRRDGKKET
EVKTPTLPQSLLTRAGAARLNQDRNQVLFQNPESLTCNGFTMALRRTSLSWRLSQRPVVT
PKPKKVPPSKKQCVHNVQDDPGVKHSGNDSGPSQDAVMSPDTENLTGEQNMCLVEGESQE
ITQSCSQTVEDSQSCISEYGNLEAGISWSLEGTHSEGLLSHQTSNNVSNSHPGCAPSPQR
STSEVTSEKNASDQFVDLCSPVESPKLSDPSQNPMGSEHNCFPDSSFRIVPELDLKTCMS
LDESVYPTALIKFILAGSQPDVLDTKSEEETLKTTPEKVGSHPNQVVDATSILGQAFSTL
PHQWGFPGANLVHSETLAKGSVSPEDLGAITMLNQPETLGMDMDAPPDLPIFLPMPPNTV
ATYSCLLSGPEPHTSASCGLEVQGATPILTLDSGHTPQPPQNSELSSVPLVIAANSTQAE
KQFGANLFPANIQGFTIAPENELQHAPLDLTQGSHAAPSKLEGGISHVSMTSSADDVKAT
MMSMPVTRASTSSLPCKSMPPTVERRKRKACGVCEPCQQKANCGECTYCKNRKNSHQICK
KRKCEVLKKKPEATSRVQVTKENKRPQREKKPKVLKTDFNNKPVNGPKSESMDYSRRGHG
EEEQRLGLFTHPLENVRKNAGGMTGIEVEKWTPNKKSHLAAGQVKGSRGANLAGVENSQP
SEDDKQQTNPSPTFAQTVRNGMKNVHCLPTDTDLPLNKLSHEEFSKVLGNNSSKLLTDPS
DCKDAMSDTTSREGCDHLKGPRNIVLFQKPGLNCRSGAESTIFNNHPDTHSTGSQHQPPE
KVPNKEPKDGSPVQPSLLSLMKDRRLTLEQVVAIEALTQLSEAPSENSSPSKTEKDEETD
QRTASLLNSCKDVLHSVRKDFQDPNVQGKSLHHDTVVFNGQNRAFKSPDSFATNQALIKS
HEYSRSPTAGKSIASGKAPLDSSKNSCPLPEESQNLENFSQVLICDQNLNSHDPSCQDAP
YSQIEEDVAAQLTQLASTINHINPEFRNAESTPESLVAKNTQQKHSQEKRMVQQKPPSSI
QNKPIVPSTKPKKTQKKARPTPYTSKRKKKAPAHSSQESDQKKQERLAIEYSKMHDIWIS
SQFQRFGQSGPRSLPVLLRNIPIFDQILKPVTQSKTSSHPNKLFPPINQIKFTRNPELAK
ETVKVEPSDSLPTCQFKMESSGQAFSEPADNSQGQPMVNVDQKAHPLPQSPPSNQCANIM
AGAAQTHFHLGARKNLVHQIPPPTLPGISPDPLLPDPASALRKGNVLSSNGITVVTTKHE
EAQTSSNGPSDPTTDSAQADFNGNVMDFLSMPAKKLIAELKEQEAATCQCARPDGGPQKD
KGPYYTHLGAGPSVAAVRELMETRYGQKGKAIRIEKIVFTGKEGKSSQGCPVAKWVIRRS
GPEEKVICLVRERVDHYCSTAVIVVLILLWEGIPRLMADRLYKELTENLRSYSGHPTDRR
CTLNKKRTCTCQGTNPKTCGASFSFGCSWSMYFNGCKFGRSANPRKFRLAPNYPLHDYYK
RITGRCSEGSDVKTGWIIPERKTLISREEKQLEENLQDLATVLAPVYKQMAPVAYQNQVE
YEDIAGDCRLGNEEGRPFSGVTCCMDFCAHSHKDIHNMNNGSTVVCTLIREDGRDRSVPG
DEQLHVLPLYRLADTDEFGSVEGMKAKIQSGAIQVNGPTRKRRLCFSEPVPRCGKRAKMK
EKDKKSGATGLSKKRNSACTKGAPGSHNTKIYSSASSTPHPVKDESTDFCPLQASSTETS
TCMYNKTASGGFPETSSILHCTMPSGAHSGANAAPGECTGIVQTAAEVAALPHQSLPIAD
SPLHAEPLTSPPDHLTSNQSNQQLPFLSSPQKLASCQVEDERHSETDEPPQPEDGNIPQL
DEFWSDSEEIYNDPAFGGVAIAPIHGSVLIECARKELHATTSLSSPKREVPFRVSLVFYQ
HKNLNKPNHGFDINRIKCKCKKVTKKPPADREDPDLSPETNLSYQIPSRVASTLTSDNVV
TVSPYALTHVAGPYNRWV
NT seq 6177 nt   +upstreamnt  +downstreamnt
atgtctcggtcccgccccacaaagccttccaaatcagtcaaaacaaagctccagaagaag
agcagccagatgaagaagaagatatcaaagcaggctgtcaaacatggggcatcagggaag
gcgctgacccctggaaaactgaagcaattaatcagaagaagagatggtaagaaggaaacg
gaagtcaaaacccccacactgccgcagagtcttctgacgagagctggggctgcccggttg
aatcaggatcgaaaccaagttctttttcagaacccagagtccttaacttgcaatgggttt
acaatggctcttcggagaacctctcttagctggcgactctcccaacgcccagtagtcaca
cccaaacctaagaaagtgccaccttcaaagaagcagtgtgtacataatgtccaggatgat
ccaggggtaaagcactccggaaatgattcaggccccagccaagatgctgtcatgtctcca
gatacagaaaacctaactggtgaacagaacatgtgtttagttgaaggcgagagccaagag
ataacccagtcttgctctcaaacagtagaagattcccaaagctgtatttctgaatatggg
aaccttgaagccggaatttcttggtcactggaagggacacacagtgaaggactactctct
catcagacatctaataatgtgagcaattcccatccggggtgtgctccatcgccccaaaga
tcaacttctgaagttacctctgagaaaaatgccagtgatcagtttgtagacttgtgctca
ccagtagagtctcccaagctgtctgatccttctcagaatcctatgggaagcgagcataat
tgctttcctgactctagttttaggatcgttcctgaattggaccttaaaacctgcatgtct
cttgatgagtctgtatatcccacagctctgataaaattcatcttggcaggctcacagccg
gatgtccttgatactaagtccgaagaagaaacccttaaaactaccccagaaaaagtgggt
agccacccaaatcaagttgtggatgccacctctatcctaggacaggcctttagtactctc
ccgcatcagtggggatttcctggtgctaacttagttcatagtgagaccctggccaagggc
tcagtctcaccagaggatcttggtgctattactatgctaaaccaaccagaaactctgggt
atggatatggatgctcccccggacctgcctatcttccttcctatgcctccaaacacagtt
gctacctacagttgtcttctttcagggcctgagccccacacctctgcttcctgtggactt
gaagtccaaggtgctaccccgattttaactttggactcaggacacactccccaaccccca
caaaactctgagttaagttcagtacctctggtaatagctgcaaacagtacacaagctgag
aagcagtttggtgccaatcttttcccagcaaacatacaagggtttacaattgcccctgag
aatgaactccagcatgctccattagatcttactcagggctctcatgctgctcccagcaaa
ttggaaggagggatttctcacgttagcatgaccagctcagctgatgatgtcaaagccaca
atgatgtctatgcctgttacacgagctagtacctcttctctcccatgtaaatctatgcca
ccaactgtggagaggaggaagcgcaaggcctgtggggtctgtgagccgtgccagcagaag
gccaactgtggggaatgcacctactgcaagaacaggaagaatagccaccagatctgtaag
aagaggaaatgcgaggtgctcaaaaagaagccagaggccacctcacgggtacaggttaca
aaagaaaacaagaggccccagagggaaaagaagcccaaagttttaaagacagactttaac
aacaaaccagtaaatggccccaaatcagagtccatggactacagtagacgtggtcatggg
gaagaagagcaaaggttgggtttgttcacacatccccttgaaaatgtaaggaagaatgca
ggaggcatgacgggaattgaagtggagaagtggacaccgaacaagaaatcacacttagca
gctggtcaagtcaaaggaagccgaggtgcaaatttagctggagttgaaaattctcaaccc
tctgaagatgacaagcaacaaaccaacccttccccgacattcgcacagactgtaagaaac
ggcatgaaaaatgtacactgtttgcccactgacacagaccttccactcaacaaattgagt
catgaggaatttagcaaggtattgggaaataattcctctaaattgctgactgatccctca
gattgcaaggatgccatgagtgacactacctctagggaggggtgtgatcatctcaagggg
ccgaggaacatcgtgctcttccagaagcctggcttaaactgcagatctggtgcagaatcc
accatctttaataatcaccctgatacacacagtactggtagccagcatcaaccccctgag
aaggtacccaacaaagaacccaaagatggctctccagttcagccaagtcttttatcccta
atgaaagacaggagattaacgctggaacaagtagtagccatagaagcactgactcagctc
tcagaagctccctcagagaactcctccccatccaagacagagaaggatgaagaaactgat
cagagaacagctagcctacttaatagctgcaaggatgtccttcattcagtgagaaaagac
ttccaagacccgaatgttcaaggaaagagtcttcaccatgacactgttgtctttaatggc
cagaacagagcgttcaagtcaccagatagttttgctactaaccaagcacttataaagtca
catgaatattcaaggtcacctacagctggtaaaagcattgctagtgggaaagctcccctt
gatagttctaagaattcatgtccattaccagaagaaagtcaaaatcttgaaaacttcagt
caggtactaatctgtgatcagaatttgaattcccatgatccatcatgccaggatgcaccc
tatagtcaaattgaagaagatgtcgcagcacaattaacccaacttgcatccaccattaat
cacatcaacccagagttcaggaatgctgaaagtacaccagaaagccttgttgcaaagaac
acacagcaaaaacatagtcaggagaaacgcatggtacaacagaaaccaccttcaagtata
caaaataaacctattgtaccatcaacaaagccaaagaagacacagaaaaaggcaagacca
actccatacacaagcaagcggaaaaagaaagccccagcccacagctctcaagaaagtgat
cagaagaagcaagagcggctagctatagagtatagcaagatgcatgacatttggatatca
tcccagtttcagaggtttggccagtctggtccccgtagtcttcctgttctgttgagaaat
attcccatctttgaccaaatattaaagcctgtgactcagagtaaaacatcctcacacccc
aataagttatttcctcctatcaatcagataaaattcacaagaaaccctgaattggcaaaa
gagacagtgaaggttgaaccatcagattctctgccaacatgccaattcaagatggaatcc
agtgggcaggcattttcagagccggcagataattctcagggacagcccatggtaaatgtc
gatcagaaagctcaccctctgccccagtcccctccatctaaccagtgtgctaatataatg
gctggtgctgcccaaacacattttcatctaggcgctcgaaagaacctggtgcatcagatt
ccaccaccgacgttgcctggtatctctcctgacccactcttaccagacccagcatcagcc
ctcaggaaagggaacgtgttaagttccaatggaattacagttgtcaccacaaagcatgaa
gaagctcaaacatcaagcaatggcccatcggatcccaccacagacagtgcacaggcagat
tttaatgggaacgtcatggacttccttagcatgcctgcaaaaaaactgatagctgaattg
aaggaacaggaagctgcaacctgtcaatgtgctcgtcctgatggaggcccacaaaaagac
aaaggcccgtattatacacaccttggggcaggaccaagtgtggctgctgtcagggagctc
atggagactaggtatggccagaagggaaaagcaatccggattgagaagatagtgttcacg
gggaaggaagggaagagctctcagggctgcccggtcgccaagtgggtgattagaagaagt
ggtcctgaagagaaggttatttgtttggttcgtgagcgtgtggaccattactgttcaacg
gctgtgatagttgttcttatcctcctgtgggaaggtatccctcgactaatggctgaccgc
ctgtacaaggagctcactgagaacttgaggtcctacagcggacatcccactgaccgaaga
tgtaccctcaacaaaaaacgtacctgcacctgtcaaggcaccaacccaaaaacatgcgga
gcgtctttctcctttggctgttcgtggagcatgtatttcaacggctgtaagtttgggaga
agtgcaaaccccagaaaattcagacttgctccaaactatcccttacatgactactataag
agaattactggaaggtgttctgaaggaagtgatgtgaaaactggatggatcattccagaa
cgaaagaccctcataagcagagaggaaaaacagcttgaggagaatttacaagacttggct
acagtattagctccagtttataagcagatggcgccagttgcttatcaaaatcaggtggaa
tatgaagacattgctggagactgtcgacttggtaatgaagaggggcgtcctttctctggt
gtcacctgttgcatggatttctgtgctcattctcacaaggacattcacaacatgaacaat
ggaagcactgtggtttgtacattgattcgagaagatggccgtgacagaagtgttcctggg
gatgagcagctacacgtcctgccactataccggcttgcagacactgatgaatttggctcc
gtggaagggatgaaagccaagatccaatctggggccatccaagtcaatgggccaaccagg
aagaggcgactgtgtttcagtgagcctgttcctcgatgtgggaagagggccaagatgaag
gagaaggacaagaaatcaggtgctactggcctcagcaagaagaggaactctgcctgcaca
aagggagccccaggttcgcacaacactaagatctattcatcagcctcatctactcctcac
ccagtgaaagatgaatctacagacttctgtcccctgcaggcttcctccacagaaacatct
acctgtatgtacaataaaacagcctcaggtggctttccagaaacaagtagcattctccac
tgcacaatgccttctggagcacacagtggtgctaatgcagctcctggggaatgtactgga
attgtgcagactgctgctgaagtggctgctcttcctcaccaatctcttcccatagcagat
tctccccttcatgctgagcctctcacaagtccacctgatcatctaacttctaaccagtca
aaccagcagctccctttcctcagctctcctcagaaactggcttcctgtcaggtggaagat
gaacggcattcggaaacagatgagcctcctcaacccgaggatggtaacatccctcaactt
gatgaattttggtcagacagtgaggagatctataatgatcctgcctttggtggcgtggcg
atagcacccattcatggctcagtgctgattgagtgtgcccggaaagagcttcatgctacc
acctctttgagttctcccaaacgagaggtcccttttcgtgtgtcccttgtattctaccag
cacaaaaatctaaataagcctaatcacggttttgatatcaacagaattaagtgtaaatgt
aaaaaagtaacaaaaaaaccccccgcagacagggaggatcctgatttatctcctgaaacc
aatttatcataccaaattccttctcgagttgcatcaaccttaaccagcgacaacgttgtt
accgtgtccccttatgctctcactcacgtcgcgggaccctacaaccgttgggtctaa

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