Rhodopseudomonas palustris HaA2: RPB_2426
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Entry
RPB_2426 CDS
T00321
Name
(GenBank) Peptidase M15D, vanX D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb01502
Vancomycin resistance
rpb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPB_2426
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RPB_2426
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpb01002
]
RPB_2426
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpb01011
]
RPB_2426
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rpb01504
]
RPB_2426
Enzymes [BR:
rpb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
RPB_2426
Peptidases and inhibitors [BR:
rpb01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
RPB_2426
Peptidoglycan biosynthesis and degradation proteins [BR:
rpb01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
RPB_2426
Antimicrobial resistance genes [BR:
rpb01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
RPB_2426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
ABD07131
UniProt:
Q2IXC9
LinkDB
All DBs
Position
2783161..2783913
Genome browser
AA seq
250 aa
AA seq
DB search
MMRRLALACFGMVLATAARAQPLPDDFVYLRDLDPSIRQDIRYAGVNNFVGRKLAGYDAN
ECIVKRSVGLALQKVQRELAPQNVSLKMLDCYRPARASREMVAWAQDGHETAAQKRYNPG
FSKSELFRLGYIAEYSGHSTGAAVDVTLVDLHAPTGPSFDPNRAYADCTAPEALRAPENS
VDMGTGYDCSDAKAHTSAKSITAGQRRWRKLLAGAMVRQGFVNFSKEWWHFSLPGGGRQA
YDFPIAPRTR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccgcctcgcgcttgcgtgcttcggcatggtgctggcgacggcggcgcgcgcg
cagccgctgcccgacgatttcgtctatctgcgcgatctcgatccgagtatccggcaggac
atccgctatgcgggcgtcaacaatttcgtcggccggaagcttgccggctatgacgccaac
gagtgcattgtgaagcggtcggtcgggctcgccttgcagaaggtgcagcgcgaactcgcg
ccgcagaacgtctcgctgaagatgctcgattgctaccgcccggcgcgggcgtcgcgcgag
atggtggcgtgggcgcaggacggccatgagaccgcggcgcagaagcgctacaatcccggc
ttcagcaagagcgagctgttccggctcggctacatcgcggaatattccggccactcgacc
ggggcggcggtcgacgtcacgctggtcgatctgcatgcgccgacgggaccttcgttcgat
ccgaatcgggcctatgcggattgcaccgcgccggaagcgctgcgggccccggagaacagc
gtcgacatgggaaccggctatgactgctcggacgccaaggcgcacacttccgccaaatcg
atcaccgccgggcagcgccgctggcgcaagctgctggcgggagcgatggtgcggcagggc
ttcgtcaatttcagcaaggagtggtggcacttctcgctgccgggcggaggccgacaggcc
tacgatttcccgatcgcgccccggacgcggtga
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