Rissa tridactyla (black-legged kittiwake): 128913075
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Entry
128913075 CDS
T09443
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128913075 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128913075 (BARD1)
04121 Ubiquitin system [BR:
rtd04121
]
128913075 (BARD1)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128913075 (BARD1)
03400 DNA repair and recombination proteins [BR:
rtd03400
]
128913075 (BARD1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
128913075 (BARD1)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
128913075 (BARD1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128913075 (BARD1)
DNA repair and recombination proteins [BR:
rtd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128913075 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
NIBRIN_BRCT_II
PTCB-BRCT
zf-rbx1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
128913075
NCBI-ProteinID:
XP_054066057
LinkDB
All DBs
Position
7:complement(41823372..41867725)
Genome browser
AA seq
791 aa
AA seq
DB search
MREALRGRSGNRPAPGGEPPAAAPSSMTPPGPPWARTRAALARLERALSCSRCAGVLRQP
VSLGQCEHVFCLSCVGDCVGTECPVCHMPAWVQDAQINRQLDNMIQLCGKLRHLLGVDTS
DSMEDMSTPMESDFGKKNKKEQIKMWFSPRSRKIRCILNKNQPETKSHDLCQDTSSIYDF
IPSPPCEKPSKQTEKPPQRQSKKMKKKRLADINKVWSLEKPEQKGGVEEKTPKEKRVTIC
SQLVVLCTPEPNSPEETPEESTKETVSSKNTENVEIAPQVKSSEKKSNSEVACPVQVSKE
KNCATETSLSVENETTPLKRGRERSRLPVTSQSKRPRTERSTDGKSGRQADRSEELPQGC
PISPATGQKTPVHVSSSVSKLTGTVMKTRSSAVFQAIDSSSLSKPPSTPSSSKSCNRVGI
PHSPSVLKSPGGNTIARRNYKGETLLHVASIKGDLAAVEELLKNGADPNVKDNAGWTPLH
EACNHGHKEVVELLLQYKALVNTTGYQNDSPLHDAARNGHVSIAELLLLHGASRDAVNIF
GLRPVDYAESEKMKSVLMLPVKNESFSLNQPCEALSPSQQTDGPLVLLGSNLSSKQQKSL
IKLATVLKAQRCTEFNSRVTHLVIPDAPMPSTVKCMMAVLTGCWVLKFEWVRACLQTAAR
EQEEKYEIQGGPQRGRLNREQLLPKLFDGCYFYFMGSFNCHQKSDLVELVKAAGGQILVR
QPKPDSDVTQTINTVAYHAESASDQRFCTQYVIYDASSKFKPEKIRQGKVWMAPSSWLID
CVMSFQLLPVK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaggcgttgcgcggccgctcgggcaaccggccggctccgggcggtgagcccccc
gccgccgccccctcctctatgacgccgcccggccccccctgggcccgcacccgcgccgcg
ctggcgcggctggagagagcgctgagctgctcccgctgcgccggcgtcctgcggcagccc
gtgtccctgggacagtgcgagcacgtcttctgcctgtcttgtgtgggtgactgtgttggc
acagagtgcccagtgtgccacatgccagcctgggtgcaagatgcgcagataaaccggcaa
ctagataacatgattcagctttgcggcaaactgcggcatctactgggtgtggacacctca
gattcaatggaagatatgtccacaccaatggaatcagactttggaaaaaagaataagaag
gaacagataaaaatgtggttcagcccaagaagtagaaagattcgatgcatcctgaacaag
aatcagcctgagactaaaagccatgacctttgtcaagacacatcttcaatttatgatttc
attccttcccctccttgtgaaaagccctccaagcagacagaaaagccaccacagagacag
agtaagaagatgaagaagaaacgtctagcagacattaacaaagtgtggagcttagagaag
cctgagcagaaaggaggagttgaggagaagactcctaaggaaaagcgtgtgaccatctgc
agtcaactggtagttctgtgcactccagaaccaaatagccctgaagagacacctgaggag
tctacaaaggaaacggtctccagcaaaaatacagaaaatgtggaaatagcaccacaggta
aaatcctcagagaagaaaagtaacagtgaggttgcatgtcctgtgcaagttagcaaggaa
aaaaattgtgctacagagacatcgctgtcagtagaaaatgaaactacacctttaaaacgt
ggaagggagcgatccagacttccagttacttctcagtctaaaagaccaagaactgagagg
agcactgatgggaagtcaggcaggcaagcagatcgctccgaggagttacctcagggttgc
cctatctccccagcaactggacagaagacaccagttcatgtttcttcctctgtatcaaaa
cttactggcaccgtaatgaagacaagaagctctgcagtctttcaagcgatagatagttct
tcactttcaaaacctccctctaccccatcttcttctaagtcctgtaatcgagtaggaata
ccacacagtccttctgtgttgaagtcccctggtggtaacacaattgccagaagaaattac
aaaggagagactttgctgcatgttgcttccatcaagggtgacttagcagctgttgaagag
ctgctgaaaaatggggcagatccaaacgtcaaagataatgctggctggacgccactgcat
gaggcatgtaatcatgggcacaaagaagtggtggagctgttgctgcaatacaaggcgtta
gtgaatactacggggtaccagaacgactcaccgcttcatgatgctgccaggaatgggcac
gtgagcattgctgagctgctgcttttgcacggtgcctcccgtgatgcagttaatatattc
ggtctgcggcctgtggactatgcagaaagcgaaaagatgaagtctgtgctaatgttacca
gtgaagaatgaatcattttcacttaaccagccctgtgaggcactaagccctagtcagcaa
acagacggaccccttgttctgctgggaagcaatcttagttccaagcaacagaagtcgctg
atcaaactagcaacagttctgaaggctcaaaggtgtacagaatttaacagcagagtaact
catcttgttatccctgatgctcccatgccaagtactgtcaaatgtatgatggctgttctg
actggatgttgggtcctcaagtttgaatgggtgcgagcctgtctacaaaccgcagcacga
gaacaagaagagaagtatgaaatccaaggtggcccacaaagagggcggctcaacagagaa
cagctgctgccaaagttgtttgatggatgctacttctattttatgggatctttcaactgt
caccagaagagtgatcttgtggaactggtcaaagcagcaggaggacaaattctggttagg
cagccaaaaccagacagtgatgtgacgcagacgatcaacacggtggcttaccatgcagaa
tctgcttctgaccagagattttgcactcagtatgtaatctatgatgcgtcttctaaattc
aagccagagaaaattcgtcagggcaaagtctggatggccccctccagctggcttatagac
tgtgtcatgtcatttcagctcctgcctgtaaaatga
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