Rathayibacter toxicus 70137: TI83_01670
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Entry
TI83_01670 CDS
T03670
Symbol
vanB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K15739
D-alanine---(R)-lactate ligase [EC:
6.1.2.1
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx01502
Vancomycin resistance
rtx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TI83_01670 (vanB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TI83_01670 (vanB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rtx01504
]
TI83_01670 (vanB)
Enzymes [BR:
rtx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.2 acid-alcohol ligases (ester synthases)
6.1.2.1 D-alanine---(R)-lactate ligase
TI83_01670 (vanB)
Antimicrobial resistance genes [BR:
rtx01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
TI83_01670 (vanB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
ATPgrasp_ST
ATP-grasp_3
TTL
Motif
Other DBs
NCBI-ProteinID:
AJM77023
UniProt:
A0A0C5B8G0
LinkDB
All DBs
Position
complement(393802..394842)
Genome browser
AA seq
346 aa
AA seq
DB search
MNTLTVGILFGGISEEHNVSVKSAREVAKNLDLERYEPVWIGITSNGNWLLCDGPEGDWE
TRTQKRAVVSPDRDVRGLLVIDEGGVETIRLDVILPVLHGTLGEDGAVQGLFELAGIPYV
GCDIQSSVICMDKSLAYTVASSAGIATPAFHILHQGEQIDGSKFDYPVYVKPARSGSSFG
VSKVDGPDGLQDAIDTARKYDVKVLIEQAVVGSEIGCSILGVAPDLFIGESDRVALSHGF
FRIHQEATPETGSENSIFIVPADISPSARAVVHEAAKAVYVAFGCRGIARVDMFLTEDGT
PVLNEVNTLPGLTSYSRYPRMMAAAGVSLRDVLTRAITLALSETVA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaacacactgaccgtagggattctctttggcgggatctcagaagaacacaatgtctcc
gttaagtcggcgagagaggttgcgaagaacctcgacctcgagcgatatgaaccggtctgg
atcggtatcaccagcaacgggaactggctgctgtgcgacgggccggagggcgactgggag
actcgcacgcagaagcgagccgtggtgtcgccagatcgcgatgtgcgcgggctgctcgtg
atagacgagggcggggttgagacgatccgcctcgatgtcattctgccggtgctccacggc
actcttggcgaagacggggcggtccagggcctgttcgaactggccggtattccttacgtg
ggctgcgatattcagagctcggtgatctgcatggataagtcgcttgcctacaccgtcgcc
tcaagcgccgggatcgcgactcccgcattccacatcctccaccagggagagcagattgat
gggtcgaaattcgactaccccgtgtatgtcaaaccagcccgttcgggctcgtcttttggc
gtgagcaaggtagatggtccagacggactccaggatgccatcgacactgcacgcaagtac
gacgtgaaagtcctcatcgagcaggctgtcgtcggcagtgaaatcggctgctcgattctc
ggggtagcccccgacctgttcatcggcgaatccgaccgagtcgcgctgagtcacggtttt
ttccgcattcatcaggaggcaacaccagaaaccggctccgagaattccatctttatcgtg
ccagccgatatatctccgagcgcccgagctgttgttcacgaggcggcaaaggccgtgtat
gtcgctttcggctgtcgggggattgcccgggtcgatatgttcttgaccgaggacggtact
ccggtcctcaacgaggtcaacaccttgcccggactgacatcctacagcagatacccgcgc
atgatggccgcggcaggggtttctcttcgtgacgtgctcacgcgagcgataaccctagcc
ctgtcggagacagtggcatga
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