Rhagoletis zephyria (snowberry fruit fly): 108364407
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Entry
108364407 CDS
T08513
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rze01009
]
108364407
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108364407
04131 Membrane trafficking [BR:
rze04131
]
108364407
03036 Chromosome and associated proteins [BR:
rze03036
]
108364407
Enzymes [BR:
rze01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108364407
Protein phosphatases and associated proteins [BR:
rze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108364407
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108364407
Membrane trafficking [BR:
rze04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108364407
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108364407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108364407
NCBI-ProteinID:
XP_017473572
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MSSPIVTRRGAQKAKIQTRAMVKSAVTASKPSAALLEAKRKAKLLKMEEQNQQDQVVKDI
FQNAVSAKSIVQMPTGIVYDESMAQHRCLWDDNHPERPERFVRVLERCKELQLIDQCKKI
PSRRATKDEVLLLHSSDHYELLQQTSGVQDETAMEDLSSKFDSIYLHPSTFELSLLATGC
TIDLIENIISGNVQNGIAIIRPPGHHAMKAEFNGYCFFNNVAIATQYALDILKLSKIMIV
DWDIHHGQGTQRFFYNDPRVLYFSIHRFEHGTFWPNLKESDFDAIGYANGMGYNFNVPLN
KTKMGNGDYLAIFQQLLIPVAIEYQPELIIISAGYDAALGCPEGEMEVTPAFYAHMLNSV
MKLAQSRVAVVLEGGYCLDSLSEGAALTLRTLLGGTCPTLVEKLEPPSEVIQDTILNCIY
AHRTYWRCLQIQPVYTMEELNNVNPQPKLHKVGRLFIGGKPLPERFPTRGTAPVTQPEVV
AQNEKRLRFLKNETKLLAPKIRVCYVYDELMLKALQSNEMFAVVPLKTCPHLKQLRPEEA
PKTIDINAPCEECSSTTENWICLSCYKILCGRYVMEHMLLHSIETAHPMALSFSDLSVWC
YPCEAYIDNSKLHIYKNLLHLHKFGEDMAWSYPAKFSNSNHDDDDEDYDEDDEFDANTFT
IQLDHSN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcccatcgttactcgtcgtggtgcgcaaaaagctaaaatacaaactcgagca
atggtcaaatctgcagtcacagctagcaagccgagcgcagcgctacttgaagctaaacgc
aaagcaaaattacttaaaatggaagagcaaaaccaacaggatcaagttgtgaaagatatt
ttccaaaatgctgtaagcgctaaatcaattgtacaaatgccaactggcattgtttacgat
gagtctatggcacagcatcgctgcctttgggatgataatcatccagaaaggccagaacga
ttcgttcgagtactggagagatgcaaagaactgcaactaattgaccagtgtaagaaaatt
ccttcacgccgtgctacaaaagacgaagtacttctactgcatagctccgaccactatgaa
cttctacagcagacttcgggtgtgcaagatgaaacggcaatggaagatctgagctcgaaa
ttcgattcaatttacttacatccgtccacatttgaattgtctctattggccacaggttgc
accattgatttaattgagaacataatttccggtaatgtgcagaatggcatagctattatt
cgaccaccgggtcatcatgcgatgaaagctgaattcaatggttactgtttcttcaacaat
gtggcaattgcaacgcaatacgctttggacattttgaagttaagtaaaataatgattgtg
gattgggacatacatcacggacaaggcacacagcgtttcttctacaatgatcctagggtt
ctttacttttccattcatcgctttgaacatggcaccttctggcctaatcttaaggaatcg
gattttgatgccatcggctacgccaacggcatgggttacaattttaatgtaccattgaat
aaaactaaaatgggcaatggcgattacttggccattttccaacaattattaatacccgtg
gccatagaatatcaaccagaattgattattatatcggcgggttatgatgcagccttgggt
tgtcccgaaggcgaaatggaggtcacacccgcattctatgctcatatgctgaattctgta
atgaagttagctcaatcacgtgtcgccgtcgtcttggaaggcggctactgccttgattcg
ttatcggagggtgcagcactcacgctgcgtacattgctgggtggcacctgccctacactg
gtggagaagttggagccaccaagcgaagttatacaagacacaatactcaattgcatttat
gcgcaccgtacatactggcgttgtctgcaaattcagccagtatataccatggaggagctg
aataatgtgaatccccagccaaagttgcacaaagttggtcgactattcattggcggcaaa
cctctgccagagcgtttcccaaccagaggcacagcgccggtaacacaacccgaagttgtg
gcacaaaatgagaaacgtttaagatttcttaaaaatgaaaccaaattgttggcaccgaaa
atacgcgtatgctacgtctacgatgagcttatgctnaaagctttgcaaagtaacgaaatg
ttcgccgttgttccattaaaaacatgtcctcatttaaaacaattgcgccctgaggaggcg
ccgaaaaccatagatatcaatgccccatgcgaagaatgctcatcaacgaccgagaattgg
atatgtttgagctgttacaaaatactttgcggtcgttatgttatggaacatatgcttttg
cacagcatcgaaacagcacatcccatggcacttagcttcagtgatttgtccgtttggtgc
tatccttgcgaggcatatattgataatagtaaattgcatatatataaaaatctactacat
ctacataagttcggcgaggatatggcatggtcgtatccagcaaaatttagcaatagtaac
cacgatgatgacgacgaagattatgatgaagacgatgagtttgatgcaaatacatttacc
attcagcttgaccacagcaactga
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