Salmo salar (Atlantic salmon): 106572925
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Entry
106572925 CDS
T04363
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106572925 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106572925 (hdac6)
04131 Membrane trafficking [BR:
sasa04131
]
106572925 (hdac6)
03036 Chromosome and associated proteins [BR:
sasa03036
]
106572925 (hdac6)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106572925 (hdac6)
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106572925 (hdac6)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106572925 (hdac6)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106572925 (hdac6)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
106572925 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
106572925
NCBI-ProteinID:
XP_014002987
UniProt:
A0A1S3MIG4
LinkDB
All DBs
Position
ssa15:100315735..100349727
Genome browser
AA seq
1115 aa
AA seq
DB search
MDSVPETRSVRRSPRTSKSPDNNAAKKESGKARKKTSNLQETRRRGRMDRSKGEEDIANQ
LNNLDLCNEASATGTGLVFDNMFTRHYCLWDPSHPECPERVTTIMDMVEKQGLLSRCVTV
EARAASNEELRLVHTKEHVDLMRSTQHMDEDQLKTLADSYDSVYIHPESYTCASLAVGSV
LQLVDKVMTSELQNGFSVARPPGHHAQVDQMNGYCMFNNLAIAARYAQTHHRVERVLIVD
WDVHHGQGIQYIFQEDPSVLYFSVHRYEEGLFWPHLPESDSSAVGTGSGEGYNINLPWNK
IGMKDADYVAAFQQLLLPVAYEFQPQLVLVAAGFDSVIGHPKGEMSASPQCFSVLTHMLL
GLAQGKLLLVLEGGYNLQSTAEGVCACLRSLLGESCPRLGSPSIPSDSALKSISRSISAL
YPYWTSLQVLEGGPLSDSDPLTPALTPAESSEELCEERRDSLDLTTGLVYDQRMMEHHNI
WDSHHPELPQRIQRIFSRHEDLGLVSRCLRIPARLALEEELALCHSLEHIAKIKATEGMK
TRDLHRLGDEYNSIFISTESYRSARLAAGACFNAVQAVLTGQVRNGVAIVRPPGHHAEKD
AACGFCFFNTAALTARYAQSISQQPLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYE
DGTFFPTSEDAHYNRVGKGKGTGFNVNIPWNGAKMGDAEYLAAFHSVVMPIAREFDPGLV
LVSAGFDAARGDPLGGYQVTPPGYAHLTHLLMGLAGGRVLVILEGGYNLTAISESMSACT
SILLGDPALPLPPLVPPHPNAAVSINKVIRTHSAYWLSLRIQLPESLRLSLPNPKPRGKR
TSKGKKSPRQRNQGGTSPGQGSPQTPSQTPSQTTPLPSGGRGDLDLDDLTKGLVSLDLNQ
STSANPSPASVPVGGARSKVRFSPTKSPVKEVKTEAVPNTPEILQPTPDKTETQAVAMAA
SDPVTKGDQESGAATVEVEGASGYSKEPVFELFCGNQDVDGSTMYVVDPLSWCPHLDSVK
PVPAGGIDVFRPCEDCGTDTENWICLCCYKVYCGRYVNQHMVTHGLVSEHRLVLSFADLS
VWCYSCQAYVHNQMVFEAKNAAHCMKFGEDMPLSN
NT seq
3346 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtgccagagaccaggtcagtcagacgttcccctcgcacgtcaaagtcaccg
gacaacaacgcagccaaaaaggagagcggcaaggcccgcaagaagacgagcaacctgcag
gagactcggaggagaggaagaatggacagaagtaaaggagaagaggacatagccaatcaa
ctgaacaacctggatctgtgtaacgaggcttcagccacagggactggtctggtgttcgac
aacatgttcacccgccattactgtctttgggatcccagccatccagaatgcccagagaga
gtgaccaccataatggacatggtggagaaacagggactgctgtcccgctgtgttacagtg
gaggcgagggctgcgtctaacgaagagttgcgcttagttcacacgaaggagcatgtagat
ctgatgaggtctactcagcatatggatgaagaccagctgaagacactggctgactcctat
gactcggtctacatccaccctgagtcatatacgtgtgccagtctggctgtgggctctgtt
ctgcagctggttgacaaggtcatgacctcagagctccagaatggattctctgttgctaga
cctccaggccaccacgcccaggtagaccagatgaacggttactgtatgtttaataatctg
gccatcgcagcgcgctacgcacagacacaccatcgggtggaacgagttctgatagtggac
tgggatgtgcatcatggccaggggatccagtacattttccaggaggatcccagcgttctg
tacttctcagtccacagatatgaggagggtttgttctggccccatctgcccgagtcagac
agcagtgctgtgggcaccggttctggagagggatacaacatcaacctgccctggaataag
attggaatgaaagatgcagactacgttgcagcattccagcagcttcttttacctgtagcc
tatgagttccagcctcagcttgtcctggtggcagcaggttttgactctgtgataggtcat
cccaagggggagatgtctgccagtcctcagtgtttctctgttctgactcacatgctgctg
ggtctggctcaggggaagttgctgctggttctggagggcggatataacctgcagtccaca
gcagagggagtgtgtgcctgtctgaggtcactattgggggagtcctgcccccgcctgggg
tcaccatccatcccgagtgacagtgccctgaaatccatctccaggtctatctctgctctg
tacccttactggaccagtctgcaggtactggagggaggtcctctatcagacagcgacccc
ctgaccccagccctgaccccagcagagagcagtgaagagctctgtgaggagagaagagac
agcttggacctgaccacgggcctggtgtacgaccagaggatgatggaacaccacaacatt
tgggacagccaccacccagagcttccccagaggatccagagaatcttctcccgtcatgag
gacctgggcttggtgtcccgttgcctgaggataccggctcgacttgccttagaggaggag
ctggctctgtgccacagcttggagcacatagccaagatcaaggccacagaggggatgaag
acgagagaccttcacagactgggagatgagtacaactctatcttcatcagtactgagagc
tacaggagcgcccggctggctgctggggcctgctttaatgcagtacaggctgttctgact
ggacaggtccgtaatggtgtggccatcgtgcgcccccctggtcaccatgccgagaaggac
gctgcctgtgggttctgtttcttcaacactgccgccctgactgcccgatacgcccagtcc
atctcccagcagcccctgcgggtcctcatcctggactgggatgttcaccatggcaacgga
acacagcacatcttcgaagaggatgacagtgtcctatacatctccctgcatcgctacgag
gatgggaccttcttccctacttcagaggatgcacactacaacagagtgggcaaggggaag
ggaacagggttcaacgtcaacatcccctggaacggagccaagatgggcgacgcagagtac
ctggctgccttccactcagtggtcatgcccatcgctagagagtttgacccaggcctggtg
ctggtatcggcagggtttgatgcagccagaggggaccctcttggagggtaccaggtgacc
cccccgggctatgcccatctcacccatctcctgatgggactggcaggcggcagagtcctg
gtcatcctggagggtggttataacctgactgccatctctgagtctatgtctgcctgcacc
agcattctcctgggagaccccgctctgcctctgcctcccttggtcccgcctcaccccaac
gcagcagtcagcatcaacaaggtcatacgcacccactccgcctattggctgtccctcagg
atacaacttccagagtctctccgcctgtctctgccaaaccccaaacccagaggaaagagg
acttctaagggcaagaagtctcccagacagcgtaaccagggcgggaccagccctggtcag
gggtcacctcagaccccatctcagaccccatctcagaccacacctctgccctctgggggt
cggggcgaccttgacctagatgacctcacgaagggactggtgtcactcgacctaaaccaa
agtacctcagccaatcccagcccagcgtctgtccctgtgggtggagccaggtcgaaggta
aggttcagtcctacgaagagccctgttaaggaggttaagactgaagctgttccaaatacg
cccgagattctccaaccaacgcctgacaagacagagacgcaggcggtcgccatggctgcc
tcagacccagttaccaagggagaccaggagagcggtgctgcgacggtggaggtggaaggg
gcgtctggttactccaaggagccggtgtttgagctgttctgtggaaaccaggatgtggac
gggagcactatgtacgtggtggatcccctgtcctggtgcccccacctagactcagtgaag
cctgttcctgctggagggatagatgtgtttcggccctgtgaggattgtgggaccgacact
gagaactggatctgtctctgctgttacaaggtgtactgtggtcgctacgtcaaccagcac
atggtaacccacggcttggtgtcagaacatcgtctggtgctgagcttcgctgacctgtct
gtctggtgttattcctgtcaggcctacgtccacaaccagatggtgtttgaagccaagaac
gctgcccactgtatgaagtttggagaggacatgcccctctctaact
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integrated database retrieval system
