Sorghum bicolor (sorghum): 8077022
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Entry
8077022 CDS
T01086
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8077022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8077022
04121 Ubiquitin system [BR:
sbi04121
]
8077022
03036 Chromosome and associated proteins [BR:
sbi03036
]
8077022
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8077022
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
8077022
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
8077022
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
8077022
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
8077022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
8077022
NCBI-ProteinID:
XP_021303652
LinkDB
All DBs
Position
9:complement(53254317..53259242)
Genome browser
AA seq
688 aa
AA seq
DB search
MRGKRKINSPTQPGFKQNTDASQLKGQILKAVADAGGLPSPDSKQSKIGAGGPNKRSRKE
SNVSKKLVLYQDAGRATELKRLPTPINLFEDECVFCHSFRTTELVHGPMVRYLNGKILST
DKGNSSNAIYVHKKCLEWAPKVWFDGDNVMSLESEIRRASRLRCKRCGLLGAALGCYEKH
CRKSYHVPCAVQIIDCRWDVAKGYVLCPEHVSKTLPCDKLRTHRKENYNSSLHQSHCSCR
EEPFTNFGEEGQQSDLHNTTSSFLPVGKCAEKEGNLYVHHRETQQTDQLNTSNTSLFPQS
QPSHKEEISPNSPRGGKQMDQHNSMSSCLPGSLYTKKEENFDNHQRKNQQTDQLNISNPF
YLPRSQHSQKEGISTNNSRYGQIDQLDTSSSSSLPLGQHSYDKATSNNCERDNQRTHECN
TSNLSSPQSCHPAEGISIAFQGEETTADQPDTSSCPSDQLVLFGLSLGVSEKDFLQKFAC
LTNAKLTEEWSKDVTHVIVAKGADSSWSRSFEALMAILFGRWVVHFEWVAGCFGTALPVP
EAAYEVAFSMDSVRTINGPKKGRMRAAEGAPNLFSGLCFCLSDYMNPDNRDRMRDLIAAA
EGRVLERRDLHLQQIKNPDDDSSVRPYFVYDVDAPPGEFSLSTLHKEMEEVREQAAAGAQ
VICHLKVLDAIAAYDAEILNVKDDSFTS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtaaaagaaaaatcaactctccaactcaacccggattcaaacagaacacagac
gcatcacagttgaaaggtcaaatcttaaaagctgtggcagatgcagggggattaccatcc
cctgacagtaagcaaagcaaaataggagccggaggacctaataagcgctcacgaaaagaa
agcaacgtgtccaaaaaacttgtcttgtaccaagacgctggacgtgctactgagttgaag
agattgccaactccaatcaatttatttgaagacgaatgtgttttttgtcattcatttaga
acgaccgagttggttcatggtccgatggtacgttatctaaatggaaaaattttgtccact
gacaagggcaactcgtcaaatgccatctatgtccataagaaatgcctcgagtgggctcct
aaagtatggtttgatggtgacaatgttatgagcttggagtcagaaattagacgtgcttca
agactgagatgcaaaagatgtggactcctgggagcagcccttggttgttatgagaagcac
tgcaggaagagttatcacgttccatgtgcagttcagataattgattgccgctgggatgtt
gctaaaggctatgtgttgtgccctgaacacgtttcaaagacactaccatgtgataagctg
cggacacatagaaaggagaattacaattcttccctgcatcaaagccattgttcatgcaga
gaagaacctttcaccaatttcggagaggaaggtcagcaatctgatttgcataacaccaca
agttctttcttgcctgtaggcaaatgtgcagagaaggaaggaaatctttatgttcatcat
agggaaactcaacaaactgatcagcttaacacttcaaatacttccttgttcccacagagc
caaccttctcacaaagaagaaatttctcccaatagcccaaggggtggcaaacaaatggat
cagcataactccatgagttcttgcttgcctggcagcctgtatacaaaaaaggaagaaaat
tttgacaatcatcaaaggaaaaatcaacaaacagatcagcttaacatttcaaatcctttc
tatttgcctcggagccaacattctcaaaaagaaggaatttccaccaacaactcaaggtat
ggacaaatagatcagcttgacacctcaagttcttcttccttgccactaggccaacattcg
tacgacaaagcaacttctaacaattgtgaaagggataatcaacgaacacatgagtgtaac
acctcaaatttatcctcgcctcagagctgtcatccagccgaaggaatttctattgctttc
caaggggaagaaacaactgcagatcagcctgacacatcgagctgcccttctgatcagttg
gttttatttggcttgtcattaggtgtgtcggagaaggatttcttgcaaaagtttgcgtgt
ttgaccaacgcgaagctgacagaagagtggtcaaaagatgtgacccatgtcattgtggcc
aaaggtgctgatagctcatggagcagatcatttgaagccctcatggccatactttttggg
agatgggttgtccattttgaatgggttgcgggctgctttgggacggcacttccagttcca
gaagctgcttacgaggtagcattcagcatggattcagtcagaacaatcaacgggccgaag
aagggacgaatgcgagcagctgaaggggcaccaaatctgttttccggactgtgtttctgc
ctgagcgactacatgaaccctgacaacagagaccgcatgcgagacctcatagccgcagcc
gaagggcgggtgctggagagacgcgacctgcacttgcaacaaataaaaaaccctgatgat
gactcttcggtgaggccgtacttcgtctacgacgttgatgcgccgccgggagaattcagc
ttgagcacgctgcacaaggagatggaggaagtgagagagcaagcggcggcgggggcgcag
gtgatctgccacctcaaggtgttggatgccattgcggcttatgacgcggagattctgaat
gtgaaggacgatagcttcacgtcgtga
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