Styela clava (leathery sea squirt): 120333263
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Entry
120333263 CDS
T07291
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120333263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120333263
04121 Ubiquitin system [BR:
sclv04121
]
120333263
03036 Chromosome and associated proteins [BR:
sclv03036
]
120333263
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120333263
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120333263
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
120333263
Chromosome and associated proteins [BR:
sclv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120333263
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120333263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_5
Ank_4
Ank_3
zf-RING_6
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
Sina_RING
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_10
zf-RING_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
120333263
NCBI-ProteinID:
XP_039256582
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MALMKDTSLAMWLDPPVDFSQSLQEIEKLEKQLSCNSCNKYMTEPITLWSCDHIFCQDCI
ETMNDKCKVCNLPCWPEDQTENKAIMDIARLTTSLKELLEGYMLETNQVSRLSRKNNEKH
PEEKSKSDKRNTAESTKSKKSTNTRAVSKKRSKFKITPSKPFPEITSDSEDSQPTENNNK
NTAIIDDANRSPAKKPKANDDTDSHLKEALNNNVFNFATPSPPPKRKRALIRTPRTPLYT
PNRNVSSPSGMKTPKTPRSTKKNKRGETLLHIAAMKGKIDDMKKLIEEGADLNAKDNAGW
TPLHEACNHGHIDAVRQLLESGVLVNTPGYEDETALMDAVLNRHLAIVELLLQYGADTSL
RNSHGQTAFDLAIDRNIKDLVVEHKYDSLDNTSSETEQLPDFAPEEIIISYSNSVRFDKV
KTCAEILKAIVNTKDAVSATHYIVPSYEDGKAPRTIKYMQAVAKGIWIVKCDWLEACTVT
GGWVAENSFEILGSREDILIGGPKKSRLNKAAQCPAVFHGCHFYLSGNFKPPNATKQQLG
ELLQSAGGILLSREPKPDSDSIQLCTKVPYHAQKDSAQYFYTYYIVYDGNQGKPSRLVRR
GKVCSVPLSWIFDCISQFCLCEIPG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatgaaagatacaagtttggcaatgtggctggatccacctgttgatttcagt
cagagtttgcaggaaattgaaaagttggaaaaacaattgtcatgcaattcatgcaacaaa
tatatgacggagccaataacgttatggagttgcgatcacatattttgtcaggattgtata
gaaacaatgaatgacaaatgtaaggtctgtaatctcccatgttggcctgaagatcaaaca
gaaaataaagctataatggatattgctagattaacaacttcattgaaagaattattggaa
ggttatatgcttgaaacaaaccaagtctctcgtttatcgaggaaaaacaatgaaaaacat
cctgaggaaaaatctaaatctgataaacgaaatacagccgaaagtacaaaatctaagaaa
tcaacaaatacccgagcagtatcaaaaaaacgttcaaaattcaaaataacgccatcaaaa
ccatttcctgaaattacatcggattcagaagactcacaaccaactgaaaacaacaacaaa
aatacagcgataatagatgatgctaataggagtcctgctaagaagccaaaagcaaatgat
gatactgattctcacttgaaagaagccttaaataataatgtatttaattttgcgacccca
tctcctccgcccaaacgaaagcgggcattaattcgaactcctcgcacaccactatacact
ccaaatcggaatgtatcttccccatctggaatgaaaacaccaaaaactccgagatcaaca
aagaagaataaaaggggagagaccttgctccacatagctgctatgaagggtaaaattgat
gacatgaagaaattaatagaggagggagctgatctcaatgctaaagacaatgctggatgg
actcctttgcacgaggcttgcaatcatgggcacattgatgcagttcggcagcttcttgaa
tctggagttttagtcaatacacctggttatgaagatgaaactgccttgatggatgctgtg
ttaaatagacatctggcaatagttgaattacttttacaatatggtgcagacacgtctttg
agaaactctcatggtcaaacagcatttgaccttgcgattgatcgaaatataaaagattta
gtagtggaacataaatatgatagtctggataatacaagttcagaaactgaacaattgccg
gattttgctccagaagaaataattatcagttattcaaattcagtgagatttgataaagta
aaaacttgtgcggagatattgaaagcgattgttaataccaaagatgcggtttcagctact
cattatattgttccgagctatgaagatggaaaagctccacgaaccatcaagtacatgcaa
gctgttgcaaaaggaatatggattgttaaatgtgactggttggaagcttgtactgtaact
ggaggatgggtggcagaaaatagttttgaaatattgggatcaagagaagatattttgatt
ggtggacctaagaaatcacgtttgaataaagcagcacagtgtcctgcagtatttcacgga
tgccatttttatttgtctggtaatttcaaaccaccaaatgcaaccaaacaacaattaggt
gaattattacaatcagcaggtgggatcctactgtcacgagaacctaaacctgatagtgat
agcattcaattatgcacaaaagtaccataccatgcacaaaaagattctgcacaatatttt
tatacatattatatagtgtatgacggcaatcaaggtaaaccatcaagactggttcgtcgt
ggaaaagtatgcagtgttcctctcagttggatattcgattgcatatctcaattctgcctg
tgtgaaattccaggataa
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