Seriola dumerili (greater amberjack): 111218592
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Entry
111218592 CDS
T05606
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111218592 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111218592 (bard1)
04121 Ubiquitin system [BR:
sdu04121
]
111218592 (bard1)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111218592 (bard1)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111218592 (bard1)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111218592 (bard1)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111218592 (bard1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111218592 (bard1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111218592 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
zf-RING_6
BRCT_2
BRCT
zf-RING_5
Prok-RING_4
Afi1
Motif
Other DBs
NCBI-GeneID:
111218592
NCBI-ProteinID:
XP_022596682
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MREPVCLGMCEHMLCRSCAGSRAGDGCVLCHSPAWVKDIQINRQLSSIIQLFCGLESLLN
PIEQPDSSVTEIQTQPDSPVFKHKKNFKIWFSPRSRKVRCTVEKPSEVIVPDSRSSGETA
AAQPDTITAQGQDLSVFNFTSSSQDSSSSQKCNNENKKREKRSTKKNAAGRKALGVTRTT
RKQTMKVTKSNRLEAINQQWGISGDVDALKEKEQPCAEGARRSSKRVSFLNPAVTSDQPK
PEVPKGSTDELSPCSSTMRESLSGGSATQMNYPSSDGQSVSDGVIQKNSLSTNDVNPAED
PEKQENISPPKPSSKRTRVVEKVGTLETTPKRPRTSPGRRRKSPGQMSPVVLNPPFLITR
CEKSTKISRDEQGHSPSLLATIGRKSPCSHGAPVGRPSTGSPAVMKKNHKGESLLHLAAI
KGDVEAVKELLDQGADPNLKDNAGWTPLHEACNLGHMAVVEVLVSRGALLNTPGYENDSP
LHDAVRNGHPAIVKLLLQHGASQNVLNLHGKQPADYAVSLEMLEIFQEASEGTQYANVSF
SPSASLSAVSDFVRRDEMVAFFASKLSQPAQLQLAKLGQLLGGKVVDTFSGSVSHIVVPE
GHMPTTYSTLLGLLAGCWVVRYSWVEACLQAGNWMPETEHEAGEGPQRSRINRCSLLPPL
FDGCFFFLLGSFKAPTKDELTKLLREGGGQLLSRQPKPDSDVTQTLSAAAYHALPGSDQA
LCTQYIIFDPQGTHKPTVVRRGKVWSAPSTWIINCIAAFRLLPVPDPQNLV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagggaacctgtgtgtctaggaatgtgtgagcatatgctgtgcaggtcctgtgctggc
tcccgtgcaggagatggctgcgtgttgtgtcacagccctgcatgggtgaaggatatccaa
atcaacaggcagctgagcagcatcatacagctcttctgtggtttggagtccctgctcaat
cccatagaacaaccagactcctctgtcactgagattcagacacaacctgacagccctgtc
tttaaacacaagaagaacttcaagatctggttcagcccccgcagccgcaaggtgcgctgc
acagtggagaagccttcagaggtcatagtaccagacagcaggtcttctggagaaacagct
gcagcacagccagataccattactgctcaaggccaggacctgtcagttttcaatttcacc
tcgtcctcccaagactcttcttcttctcaaaaatgcaacaatgaaaacaaaaaaagggag
aagaggtcaactaagaaaaatgctgctggcaggaaggcactgggagtcacaaggaccaca
cgaaagcagaccatgaaggtgacgaagagcaacaggctagaggctataaatcagcaatgg
gggatcagtggggatgtagatgccttaaaggaaaaagagcagccctgtgctgaaggggca
aggaggtccagtaaaagggtttctttcctaaaccctgctgtcacctccgaccagcctaag
cctgaagtaccaaaggggagtactgatgaactcagcccttgtagcagcaccatgagggaa
agcctctcaggaggcagcgctactcaaatgaattacccctcctcagatggtcagagcgtg
tcagacggtgtcatccaaaaaaactcactgtctacaaatgacgtcaacccagctgaagat
cctgaaaaacaggagaacatttctcccccaaagccttcctcaaaaagaaccagggtggtg
gagaaagttggcaccttggagaccacaccaaaaaggcccaggacttccccaggccggagg
agaaaatccccgggtcagatgtcaccagtcgtccttaaccctccttttttgattaccagg
tgtgaaaagagcaccaaaatctctagagatgagcaaggacacagcccctctctcctagcc
accatcggtcgaaaatctccctgttctcatggtgcacctgttggacggcccagcacagga
agccctgcagttatgaagaagaaccacaagggagagagcctgctacatctagctgctata
aagggagatgtagaggctgtcaaggaactgctggaccagggggctgaccctaacctgaag
gataatgctgggtggacacctctgcacgaggcatgtaacctgggtcacatggcagttgtg
gaggttttggtctcaaggggagccctattgaacacacctggctatgaaaacgactcgcca
ctccatgatgctgtgaggaacggacatccagccattgtcaaactgctgctgcagcatgga
gcctcacagaatgtacttaatctgcatggaaagcagcctgcagattatgcagtgagtctg
gagatgctggagattttccaggaagcctcagagggaacccaatatgctaatgtttctttt
agcccctcagccagtctctctgcggtgagtgactttgtgaggagagatgaaatggttgcg
ttttttgccagcaagctttctcagccagcacagcttcaactagccaaactgggacagcta
ctaggaggaaaagtggttgacaccttttctggctcagtgagccacattgtggtgccagaa
ggacacatgcccactacctactccaccctcctgggtctccttgctggctgctgggttgtc
agatacagctgggtggaggcatgtctgcaggcgggcaactggatgcccgaaactgagcac
gaagcaggagaaggcccccagcgcagtcgcatcaacagatgtagcttgctcccaccgctc
ttcgacggctgtttcttcttcctcctgggatcctttaaggcgcctaccaaagatgagctc
accaagctgctccgagaaggaggaggtcagctcctgagccggcagcccaagcccgacagc
gatgtgacacaaaccctgagtgcagctgcttaccacgccctgccaggctccgaccaggct
ctctgcacccagtacattatctttgatcctcaaggaactcacaagcccacagtggtcaga
cgaggtaaggtgtggtcagctccctccacctggattatcaactgcattgcagccttccgg
ctccttcctgtccctgatcctcaaaatctggtgtga
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integrated database retrieval system
