Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_1596
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Entry
SCH_1596 CDS
T00240
Symbol
pdgL
Name
(GenBank) Periplasmic dipeptidase for D-ala-D-ala digestion in peptidoglycan
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec01502
Vancomycin resistance
sec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCH_1596 (pdgL)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCH_1596 (pdgL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sec01002
]
SCH_1596 (pdgL)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sec01011
]
SCH_1596 (pdgL)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sec01504
]
SCH_1596 (pdgL)
Enzymes [BR:
sec01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
SCH_1596 (pdgL)
Peptidases and inhibitors [BR:
sec01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
SCH_1596 (pdgL)
Peptidoglycan biosynthesis and degradation proteins [BR:
sec01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
SCH_1596 (pdgL)
Antimicrobial resistance genes [BR:
sec01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SCH_1596 (pdgL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Y1_Tnp
Motif
Other DBs
NCBI-ProteinID:
AAX65502
UniProt:
Q57P59
LinkDB
All DBs
Position
complement(1703102..1703872)
Genome browser
AA seq
256 aa
AA seq
DB search
MVKCVSSFLLFSLLSVQAMSAENHIDLHQPKDFVDITTVAPDVQVDMRYFSSHNFIGRPI
KGYNAPVCLLTRPAANAVKQVADRLRPFGLTLKIYDCYRPQSAVNDFIAWAKDPSQNQMK
NEFYPQVEKNRLFEEGYLAARSGHSRGSTLDLTIVPLDSKIPIYDPGRPLVNCTASAAQR
SPDNSLDFGTGFDCFSPLSHPDNVILTAQQRANRLLLQTLMRDAGFTPLDTEWWHFSLTH
EPYPNTWFDFPVKQRP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatgcgtatcttctttcctcctgttcagcctgttgtccgttcaggcaatgtca
gctgaaaaccatattgatctccaccagccaaaagactttgtcgatattactacggtcgcc
cccgacgtacaggtagacatgcgatacttcagttcccataactttattggtcgccccatt
aaaggctataacgcgcctgtttgcctgttaacacgaccagccgcaaacgcagtgaagcag
gtcgccgatcgtttacgcccctttggacttaccttaaaaatatatgattgctaccgtccg
caaagcgcagtgaacgactttatcgcgtgggccaaagatccttctcaaaaccaaatgaaa
aacgaattttatccgcaggtagagaaaaatcgtctgtttgaggaaggttatcttgccgcc
agatccggccacagtcggggaagtacgcttgatctaacgattgttccacttgacagtaaa
ataccaatatacgatcccggacgaccactggtgaattgtactgcgtccgcggcgcaacgc
tcgccagataatagtctggattttggtaccggctttgactgttttagtccgttatcccat
cccgataatgtcatacttaccgctcagcaacgcgcaaataggttgttattacaaacattg
atgcgtgatgcgggttttacgccactggatactgaatggtggcacttctctcttactcat
gaaccatacccgaacacctggtttgactttcccgttaagcagagaccctga
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