Prodigiosinella confusarubida ATCC 39006: Ser39006_017725
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Entry
Ser39006_017725 CDS
T05290
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera01502
Vancomycin resistance
sera02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ser39006_017725
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ser39006_017725
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sera01002
]
Ser39006_017725
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Ser39006_017725
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sera01504
]
Ser39006_017725
Enzymes [BR:
sera01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
Ser39006_017725
Peptidases and inhibitors [BR:
sera01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Ser39006_017725
Peptidoglycan biosynthesis and degradation proteins [BR:
sera01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Ser39006_017725
Antimicrobial resistance genes [BR:
sera01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Ser39006_017725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
AUH05807
UniProt:
A0A2I5TAA0
LinkDB
All DBs
Position
complement(3896899..3897489)
Genome browser
AA seq
196 aa
AA seq
DB search
MQNGLINDDNVVLVDIAELLPDAVIDLKYATADNLTGQPIYREHHCLLHPDAAKALVRSA
AVAKLAGFGLKIFDAYRPQQAQACLWTAFPNPEYVVDIRRGSHHSRGVAIDLTLLNEQGE
ALDMGADFDEMHERSHPFYPDFPPQIQRNRLLLNAVMVAGGYRGITSEWWHFELPDAVSY
PLLTDRFGCYPPISAQ
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacggtttgattaacgatgacaacgtggtgctggtggatatcgccgaactactg
ccggatgcggtcatcgacctgaaatacgccaccgccgataacctgaccggtcagcctatc
taccgggagcatcactgtctcctgcatcctgatgcggctaaggctctggtacgcagtgcc
gcagtggcaaagttggccggtttcggtctgaaaatttttgatgcttatcgcccgcagcag
gcacaggcctgcctgtggacggcattccccaacccggaatatgtggtggatattcgtcgt
ggttcccatcacagccgtggggtggcaatcgatctcaccttgttgaacgaacagggtgag
gcgctcgatatgggggctgattttgatgaaatgcacgaacgttctcacccgttttaccct
gatttccccccgcagattcagcgtaaccgcctgttgctcaatgcggtgatggtagccgga
ggatatcgggggattaccagcgaatggtggcatttcgaactgccagacgcggtgtcgtac
ccgctgttaactgaccgtttcggctgttatccgccgatatcggcccagtga
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