Sturnira hondurensis: 118998322
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Entry
118998322 CDS
T07222
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
shon
Sturnira hondurensis
Pathway
shon04613
Neutrophil extracellular trap formation
shon05014
Amyotrophic lateral sclerosis
shon05034
Alcoholism
shon05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
shon00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
118998322 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
118998322 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118998322 (HDAC6)
09165 Substance dependence
05034 Alcoholism
118998322 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shon01009
]
118998322 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shon03019
]
118998322 (HDAC6)
04131 Membrane trafficking [BR:
shon04131
]
118998322 (HDAC6)
03036 Chromosome and associated proteins [BR:
shon03036
]
118998322 (HDAC6)
Enzymes [BR:
shon01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118998322 (HDAC6)
Protein phosphatases and associated proteins [BR:
shon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118998322 (HDAC6)
Messenger RNA biogenesis [BR:
shon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118998322 (HDAC6)
Membrane trafficking [BR:
shon04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118998322 (HDAC6)
Chromosome and associated proteins [BR:
shon03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118998322 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118998322
NCBI-ProteinID:
XP_036918322
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNLNSPPRDSSIVSKPGVKGAGLRSSPKLAEVKKKGRMKKLSQ
PAEQDLVVGLQGLDLNLEAKTLPGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIR
EGLMDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSY
TCACLASGSVLRLVDAVLGAEIQNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQVK
HRIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQ
GYTINVPWNQVGMRDADYIAAFLRVLLPVSLEFQPQLVLVAAGFDALQGDPKGEMATTPA
GFAQLTHLLMGLAGGRLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCASAL
SSLSCTLEALEPFWETLMRSDDTLEGVHVEGYNVEEEEEGPWPPQALPILMWPVLQARTG
LVYDQRMMDHYNLWDNQHPEIPQRISRIMCRLEELGLAGRCLILPARPATDAELLTCHSA
EYVGRLRATEKMKTRELHRESASFESIYICPSTFACAQLATGASCCLVEAVLAGEVLNGV
AVVRPPGHHAEHDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEE
DPSVLYISLHRYDHGTFFPMGIEGASNQVGRSAGTGFTVNVAWNGPRVGDAEYLAAWHRL
VLPIAYEFNPELVLVSAGFDAAWRDPLGGCQLSPEGYAHLTHLLMGLAGGRIILILEGGY
NLTSVSDSMAACTRTLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRATKVEDK
EGPFSSTSVTEEAIQPANPGSTERLTTLEGSNLDAGMGKATPAPSVQESTPAQTNSETAV
AQLTKDQSQEAATGGATLDQTTSEAATLDQTTSEKPVGGAELIQTTQASRANNQTPPTSP
ARGAISQISHSPLVGNLRTLELGSKTQEAPESQIAEEERLLGETAGGQDIDDSMQAFGGT
DQATFYAVTPLPWCPHLAAVCPIPEGGLDVTQPCQECGALQENWACLSCYEVYCSRYVNA
HMLQHHESSGHPLVLSYVDLSTWCYGCQAYVHHQALLDVKNIAHQNKFGEDMPHSH
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggactccaccacaaccaggcagcgaagaagtaggcacaacctc
aactcgcccccccgtgactccagcatcgtctcgaagccaggtgttaagggtgctggactc
cgctccagccccaaactagcggaggtaaagaagaaaggcagaatgaagaaactcagccaa
ccagcagagcaagatctagttgtggggcttcaagggctggatctgaaccttgaggccaag
acactgcctggtactggcttggtgtttgatgagcagctaaatgaattccactgcctctgg
gatgacagcttccctgaaggcccagaacggctccatgccatcaaggagcagctgatccgg
gagggcctcatggatcgctgtgtgtcctttcaggcccgatttgctgaaaaggaggagctg
atgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaatgag
ggagaactccgcatcctagcagatacctatgactcagtttatttgcatccgaactcatac
acctgtgcctgcctggcttcaggctctgtcctcaggctggtggatgcggtcctgggggcc
gagatccagaatggcatggccatcatcaggcctccaggacaccacgcccagcacagtctt
atggatggatattgcatgttcaaccatgtggctgtggctgctcgctacgctcaagtgaag
caccgcattcagagggtccttattgtggattgggatgtgcaccatggtcaaggaacacag
ttcacttttgaccaggaccccagtgtgctctatttttccatccatcgctatgagcagggt
cggttctggccccacctgaaggcctctaactggtccaccataggttttggccagggccag
ggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacattgcc
gctttcctgcgagtcctgctgcctgtctcccttgagttccagccccagctggtcctggtg
gccgctggatttgatgccctccaaggagaccccaagggcgagatggctaccactccagca
gggtttgcccagctaacccacctgctcatgggtctggcaggaggcaggctgatcttgtct
ctggagggtggctacaacctccgctccctggctgagggcgtcagcgcctcactccacacc
cttctgggtgacccttgccccatgctggagtcccctggtgccccctgcgcaagtgccctg
tcatcattgtcctgtactctggaagccctggagcccttctgggagacacttatgagatca
gatgacaccctggagggggtccatgtggaggggtacaatgtggaggaagaagaggaagga
ccatggccaccccaagctctcccaatcctgatgtggccggtgttgcaggctcgcacaggg
ctggtctatgaccagcggatgatggatcactataacttgtgggacaaccaacaccccgag
ataccccagcgtatctcccggatcatgtgccgtctggaggagctgggccttgccgggcgc
tgtctcatcctgcctgcacgccctgccacggacgcagagctgctcacctgccacagtgct
gagtatgtgggtcgtctacgggccacagagaaaatgaaaacccgggagctgcaccgagag
agcgccagctttgagtccatctacatctgtcccagcaccttcgcctgtgcacagctggcc
actggtgcctcatgctgtcttgtggaggctgtgctggcgggagaggttttgaatggcgtt
gctgtggtgcgtcctcccggccaccatgcagagcacgatgctgcttgtggtttctgcttt
ttcaactctgtggctgtggctgctcgccatgcccaggccatcagtgggcatgcactgcgg
atcctgattgtggactgggacgtgcatcatggtaatggaactcagcacatattcgaggag
gaccccagtgtgctctacatttccctgcaccgctatgatcatggcaccttctttcccatg
gggattgagggcgccagcaaccaggtgggccggtctgcgggcacaggctttaccgtcaat
gtggcgtggaatgggccgcgtgtgggtgacgccgagtacctggctgcttggcatcgtctg
gtactccccattgcctatgagtttaacccagaactggtgctggtctcagctggctttgat
gccgcatggagagacccgctggggggctgccagctgtcacccgagggctatgcccacctc
acccacttgctgatgggccttgccggtggccgcattatcctaatcctagagggtggctat
aacctgacatccgtctcggactccatggctgcctgtactcgcaccctccttggggacccg
ccacccctgctgaccctgtcacggcccccactatcaggggccctggcctctatcactgag
accatccaagtccatcgcagatactggcgcagcttgcgggccacaaaggtcgaagacaag
gaaggacccttcagttctacgtcagtcactgaggaggcaatccaaccagccaatcctgga
tcaacggagaggctgaccacactagaagggtccaatctggatgcaggcatggggaaggct
accccagcaccctctgtgcaagagtccactccagcccagactaactcagagacagctgtg
gcacagctcactaaggaccagtctcaagaggcagccacagggggagccacgcttgaccag
accacctcagaggcagccacactggaccagactacctcagagaagcctgtggggggagct
gagcttattcaaaccactcaagcctcacgtgctaacaaccagactcctccaacctcacct
gcgcgaggagccatatcccagatatcccacagtccactggttgggaatctcaggaccttg
gaactaggcagcaagactcaggaggccccagagtctcagattgcagaagaggagaggctg
ctgggagagacagctggaggtcaggacatagatgactcaatgcaggcctttgggggcact
gaccaggctacgttttatgctgtgacacccctgccctggtgtccccatttggcggcagtg
tgccccatacctgaaggaggcctggatgtgacccaaccttgtcaggagtgtggagcgctc
caggagaactgggcatgtctgtcttgctacgaggtctactgcagccgttacgtcaatgcc
catatgctccagcaccatgaaagctcgggacacccactggtcctcagctacgttgacctg
tctacctggtgttacggatgtcaggcctatgttcaccatcaggctctcctagatgtgaag
aacatcgcccaccagaacaagtttggggaagacatgccccactcacactaa
DBGET
integrated database retrieval system
