Sarcophilus harrisii (Tasmanian devil): 100914588
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Entry
100914588 CDS
T02286
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr02010
ABC transporters
shr04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100914588
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
100914588
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100914588
Enzymes [BR:
shr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100914588
Transporters [BR:
shr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100914588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA
AAA_29
G-alpha
SbcC_Walker_B
AAA_7
AAA_15
nSTAND1
AAA_28
AAA_14
DUF5906
DUF815
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
100914588
NCBI-ProteinID:
XP_031795799
Ensembl:
ENSSHAG00000015904
LinkDB
All DBs
Position
5:complement(239320679..239427324)
Genome browser
AA seq
1281 aa
AA seq
DB search
MDRENGRNGTAGSSSGAEGDFELATTSNRQERKKMKKTHMISPLTLFRYSDWKDKLFMVL
GTIMAIAHGSGLPLMMIVFGEMTDSFVNTAGNFSFPVNFSLAMLNPARILEEEMTRYAYY
YSGLGGGVLIAAYIQVSFWTLAAGRQIKKIRQKFFHAVLRQEIGWFDINDTTELNTRLTD
DISKISEGIGDKVGMFFQAVATFFAGFIVGFIRGWKLTLVIMAISPILGLSAAVWAKILS
AFSDKELAAYAKAGAVAEEALSAIKTVIAFGGQNKELERYQRHLENAKKIGIKKAISANI
SMGIAFLLIYASYALAFWYGSTLVISKEYTIGNALTVFFSILIGAFSVGQAAPCIDSFAN
ARGAAYAIFDIIDNNPKIDSFSEIGHKPDHIKGNLEFRNVHFSYPSRADVKILKGINLKV
NSGQTVALVGNSGCGKSTTVQLIQRLYDPLEGTINIDGQDIRTLNVRYLREIIGVVSQEP
VLFATTIAENIRYGKEDATMDEVKKAVKDANAYDFIMKLPEKFDTLVGERGAQLSGGQKQ
RIAIARALVRNPKILLLDEATSALDTESESEVQAALDKAREGRTTIVIAHRLSTIRNADV
IAGFEDGVITEQGSHSELMKREGVYFKLVNMQTSGNQIQSEEFEVELKDENATGMASNGL
KSRLFRNSTHKSFRNSRKHQNSFDVAPEELDSDVPPVSFLKVLKLNKTEWPYFVVGTLCA
IVNGALQPAFSIIFSEMLAIFGPGDDEMKQQKCNMFSLLFLGLGIISFFTFFLQGFTFGK
AGEILTTRLRFMAFKAMLRQDMSWFDDPKNSTGALSTRLATDASQVQGATGSRLALIAQN
TANLGTGIIISFVYGWQLTLLLLSVVPIIAISGIIEMKMLAGNAKRDKKELEAAGKIATE
AIDNIRTVVSLTQERKFESMYGENLNGPYRNSVRKAHIYGITFSISQAFMYFSYAGCFRF
GAYLIVNGHMRFRDVILVFSAIVFGAMALGHASSFAPDYAKAKLSAAHLFMLFERQPLID
SYSEAGLKPDKFEGNVTFNEVVFNYPTRPNVPVLQGLTLEVKKGQTLALVGSSGCGKSTV
VQLLERFYDPLAGKVLLDGQETKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGNNSRE
VSQEEIVNAAKAANIHPFIETLPEKYETRVGDKGTQLSGGQKQRIAIARALIRHPRILLL
DEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGKVKEQGTHQQ
LLAQKGIYFSLVNVQTGTQNL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggagaacggaaggaacgggaccgccggcagctcctcgggagcggagggtgac
tttgaactagccaccacaagtaaccggcaagagagaaaaaaaatgaagaaaactcacatg
atcagcccattaacattgtttcgatattctgattggaaagataaattatttatggtgctg
ggcaccatcatggccattgctcatggttcaggtctcccgcttatgatgatagtatttgga
gaaatgacagatagctttgtaaatactgcaggaaacttttcttttccagtaaatttttct
ttggcgatgttaaatccagccagaattctggaggaagaaatgaccagatatgcctattat
tattcaggattgggaggaggtgttctaatagctgcttacattcaggtttccttctggacc
ttagctgctggccggcaaattaaaaaaattaggcaaaaattttttcatgctgttctccga
caggaaatagggtggtttgatatcaatgataccacagaactcaacacacgcctcacggat
gacatctccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcagtg
gcaacattttttgcaggattcatagtggggttcataagaggatggaagctaacacttgtg
attatggccatcagccctatcctgggactttctgcggctgtctgggcaaagatactgtct
gcatttagtgacaaagaattagcagcctatgctaaggctggcgcagtggcagaggaggca
ctgtctgccatcaagactgtgatagccttcgggggacaaaacaaagaacttgaaaggtat
cagagacatttagaaaatgcaaaaaagattggaataaagaaagctatttcagcaaacatt
tctatgggcattgccttcctgttaatatatgcatcctatgcactggctttctggtatgga
tctactctagtcatatccaaggaatatactattggaaacgcacttacagtctttttttcg
atattgataggagctttcagtgttggacaggctgcaccatgcattgattcatttgctaat
gccagaggagcagcctatgcaatctttgatatcattgataacaatcctaaaattgacagt
ttttctgagattggtcataaaccggaccacatcaaggggaatctggagttcagaaatgtt
cacttctcatatccttcccgagctgatgtcaagattttaaagggaatcaatctcaaggtt
aacagtggacaaacagtagccctggttggtaacagtggctgtggcaaaagtacaactgtt
caattgatacagagactgtatgaccctctggagggcacgatcaacattgatgggcaagat
attcgaactctaaatgtcaggtatctgagggagataattggagtcgtgagtcaggaaccg
gtgctatttgctaccacgattgctgaaaacattcgctatggcaaggaagatgccaccatg
gacgaagtcaagaaagctgtcaaagatgccaatgcctatgacttcatcatgaaactacca
gagaaatttgatacactcgttggagaaaggggtgcccagctgagtggaggtcagaagcag
agaatagcaattgcccgagctcttgttcggaatcccaagatccttctgcttgatgaggca
acatcagccttggatactgagagtgaatcagaggtgcaagctgctctggataaggcaaga
gaaggtcgaactaccattgtgatagctcatcgtttgtctacaattcgaaatgcagatgtc
atagctggttttgaggatggtgtcattacagaacaagggagccacagtgagctgatgaaa
agggaaggggtttacttcaaacttgttaacatgcagacatcaggaaaccagattcagtca
gaagaatttgaagttgaattaaaagatgagaatgccactggaatggcatcaaatggcctg
aaatctcgcctttttaggaattccacacacaaaagttttagaaattcacgaaaacatcag
aatagctttgatgtagctccagaagagcttgattcagacgtgcctccagtatcttttctc
aaagtcctgaagctgaataagacagaatggccttactttgtcgtgggaactctctgcgcc
attgtcaatggggccttacagccagcattttccataatcttctcagagatgttagcaatt
tttggaccaggggatgatgaaatgaagcagcagaagtgcaatatgttctcattgctcttt
ttagggcttggaattatttctttctttacttttttcctccagggatttacatttggaaaa
gctggggagatccttacaacaagacttcggtttatggcttttaaggccatgctaagacag
gacatgagttggtttgatgatcctaagaacagtactggtgcactttcgacaagacttgcg
actgatgcttcccaagtccaaggggccacaggtagcaggctggctttgattgctcagaat
acagcaaaccttgggactgggataatcatatcatttgtatacggttggcaattaaccctt
ttgctattatcagttgttccaatcattgctatatcaggaatcattgaaatgaaaatgttg
gctggaaatgctaaaagagacaaaaaggaactagaagctgctggaaagattgcgacagag
gcaatagacaatataaggacagttgtatcgttgacccaagaaaggaaatttgagtcaatg
tatggagaaaatttgaatgggccctacagaaattctgtgcggaaagcccatatctatgga
atcacttttagcatttcccaggcatttatgtatttttcctatgctggttgttttcgattt
ggtgcttatctaatagtgaatggacacatgcgttttcgagatgttattctggtgttttct
gccattgtatttggggccatggccttaggacacgctagttcatttgctccagactatgct
aaagccaagttgtcagcagcccacttatttatgttgttcgaaagacagcctctcatagac
agctacagtgaagcaggactgaagccagataagtttgaagggaatgtgacatttaatgaa
gttgtgttcaactatcctacccggccaaatgtccctgttcttcaaggtctaaccttggag
gtaaagaagggacagaccctggctcttgtgggcagcagtggttgtgggaagagtacagtg
gttcaactgcttgagagattctatgatcccctggctggaaaggtgcttctggatggtcaa
gaaaccaagaagcttaacgtccagtggctccgggctcagcttggcattgtgtcccaggag
cccatcttgttcgactgcagcattgcagagaacatcgcctatggaaacaacagtcgggag
gtatcacaggaagaaattgtgaatgcagccaaagccgccaatatccatcctttcattgaa
acactacctgaaaaatatgaaaccagggtgggagacaaagggactcaactctcagggggt
cagaaacagcgtatcgctattgctcgagccctcatcagacatcctcgaatcctcctgttg
gatgaagccacatcagcactggatacagaaagtgaaaagattgttcaagaagccctggac
aaggccagagaaggtcgtacgtgtattgtgatcgctcaccgcctctccaccatccagaat
gccgaccttatcgtggttttccagaatggcaaggtcaaagaacagggaacacaccaacag
ctgctggctcagaaaggcatctatttttcactggtcaacgttcagactgggacacagaac
ttatga
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integrated database retrieval system
