Stereum hirsutum: STEHIDRAFT_66344
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Entry
STEHIDRAFT_66344 CDS
T03127
Name
(RefSeq) Nucleotidyltransferase
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
shs
Stereum hirsutum
Pathway
shs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STEHIDRAFT_66344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_66344
Enzymes [BR:
shs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STEHIDRAFT_66344
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
STEHIDRAFT_66344
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
STEHIDRAFT_66344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
HHH_5
Cdd1
NTP_transf_2
DUF6602
Motif
Other DBs
NCBI-GeneID:
18806283
NCBI-ProteinID:
XP_007309158
JGI:
Stehi1_66344
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
NAYKIRSFQTAINVIKTLDYPLKSGKEAEKLRGIGPKISARIDAFINGKGPKTQAKALKK
TKAASLFQTVPGVGYATAMKLVNAGCTSIKDMRKPEYFDMLTPAQKVGLMYIDHLDMPVT
REQSESVADFIRDHISSKFEIVHSGSYRRKALTSSDIDILLFHPSYVHIPFPNVLPPDPS
TINSTSVGPSSLTRGNAPVPFRSTSHTKEQRLASPLLMDVVRPLEDSGLLAATLSGGPRK
WQGVTIIPGRMNGRNTGQRLRDIRATRGIYRRLDLNLAPMGSRGAALLALTGDVDFVRTC
RINAIKLGMHLNEFGLWRWNDSASPPPLPDLVRRNSKYAKEREQRHKEEAERRKNARGWW
ELVEGESEEGILRELGMGWVPPEKRNFRFLTSR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
aatgcatataaaattcggtccttccaaaccgcgattaatgtcatcaagaccctggactat
cctctaaagtccgggaaggaggcggagaagttgaggggaataggaccgaagatttcagca
cgaatagatgccttcataaacgggaaaggacctaaaacgcaggctaaagccctgaaaaaa
accaaggctgcgagcttgtttcagaccgttccgggcgtggggtatgcgacggcgatgaag
ctagtgaacgccggatgtacttctatcaaggacatgcgcaaaccggaatactttgatatg
ctcacgcccgctcagaaggtaggattgatgtatatcgatcatttggacatgccggtcaca
cgagaacagtctgagagtgttgctgatttcatccgagatcacatctcttcgaagttcgag
atcgtccactcaggaagctaccgtcgcaaagccctcacctcctccgacatcgacatcctc
ctcttccacccctcatacgtccacatcccctttcccaacgtcctcccaccagacccttcc
accatcaactccacatccgtcggaccatcctccctcacgcgcggcaacgcccccgtcccg
tttcggtccacgtcacatacgaaagaacaaagacttgcgagtccgttgttgatggatgtc
gtgaggccgctggaggattctgggttgttggctgcgacgttgagtggggggccgaggaag
tggcagggcgtgactatcataccagggaggatgaatgggaggaatactgggcagaggctg
agagatatcagggctacgcggggtatataccgcagactcgatctaaatctcgcaccaatg
ggttcacgcggcgccgcccttctcgctctcaccggcgacgtcgatttcgtccgcacatgc
cgcatcaacgccatcaagctcggcatgcatctcaacgagtttggactctggcgatggaat
gactccgcctcgccaccacccttacccgacctcgtacgtcgaaactcgaagtacgcaaag
gagagggagcagagacataaggaggaggcagagaggaggaagaatgcgaggggctggtgg
gagctggttgagggggagtcggaggaggggattttgagagagttggggatggggtgggtg
ccgccggagaagaggaattttaggtttttgacgagtaggtag
DBGET
integrated database retrieval system
