Saccoglossus kowalevskii (acorn worm): 102809673
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Entry
102809673 CDS
T04123
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102809673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
102809673
04121 Ubiquitin system [BR:
sko04121
]
102809673
03036 Chromosome and associated proteins [BR:
sko03036
]
102809673
03400 DNA repair and recombination proteins [BR:
sko03400
]
102809673
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102809673
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
102809673
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102809673
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102809673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
BRCT
zf-RING_6
BRCT_2
Ank_5
Ank_3
zf-C3HC4_2
zf-C3HC4
RTT107_BRCT_5
zf-C3HC4_4
zf-RING_5
zf-RING_UBOX
zf-RING_10
DapB_N
zf-C3HC4_3
zf-RING_2
zf-Nse
TRAF3_RING
DUF1272
Motif
Other DBs
NCBI-GeneID:
102809673
NCBI-ProteinID:
XP_006824924
LinkDB
All DBs
Position
Un
AA seq
836 aa
AA seq
DB search
MEDETNRWEQTKKALGVLESTLECPLCHSILKDPSTLGNCDHSFCRSCVGSHLGNSCPVC
SAPAWVKDLQTNRQLTNVVHLCMKLQKIVKGNYIKKKEERSDEDHVSVETCDDADLNEHI
ENENTSDKTVRNTSNNDLKDNTESDSDVHDDSCHSDDTEDELEEEYSPDNDDKDDEDFEP
ASNRRRKRNVAKKLDIKEKNSLVLSQKSKTMIETKFSSKHSIMRYTVNLRARESKVPEVQ
NVKNNLPRKKVVDANNSDVFDFIASPTKPKPLVGRIARAVKKQTIESYNKQWSLRNRNCT
RRTADKDGDAGENEKRVSFREVDESVSRQQDDKYDGSLQVEKENTENKEELGASDQSVRR
NVSGENINKQHILRKRLSEENADDITAEKLLKPGVEITGHSKRPQRKGRRSHENTPATGT
RKSVSPKSSLSSPVGRDINTPVRRTRRSTSPGSSLSSPPGICSKSPGNKIKRNAKGETAL
HIASIKGDAKTVKELLESGFEPNLKDNAGWTPLHEACNHGYIEIVTSLLDHGAFINTPGY
ENDSPLHDALYNRQLDIVKLLVQRGASLDVRNIHGLTPWDVAKNDDLRKALNTVPVSITP
QMSSPKFETMCRSKMVDIVIVGTGLKREQKAKLDHCAKLLKGKVLDEFDDSVSHVVTSCN
EDGQCPRTMKYLQAILHGKWIVSFDWVTTCLKKQQLVEEQYFEVTGTVTHPFSLGPRKAR
LNHEQQYPGLFNGCHFYFHGKFNSPTPVKEDLNQLVKSGDGKILLREPKMDDCNSSQEVP
YHATPNSDLSECTHYIIHDHDVQKPPSKIRSKKLRSASVKWLMDSISQFTLLDITD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaactaatcgctgggaacaaacaaagaaagcattgggcgttttagagagc
acacttgaatgccctttatgccatagtattttaaaagatccgtcgactcttgggaactgt
gatcattcattctgcagatcctgtgttggcagccatcttggcaatagttgccctgtgtgc
agcgcccccgcatgggttaaagacttgcagacaaacagacaacttacaaatgttgtacac
ctttgtatgaaactacagaagattgtgaaaggaaattatatcaaaaaaaaagaagagaga
tctgatgaagatcatgtttccgtggaaacttgtgatgatgcagatctgaatgaacacatt
gaaaacgagaacacatctgataaaactgtaagaaacacttcaaataatgacttgaaagat
aacactgaaagtgattctgatgttcacgatgacagttgccatagtgatgatacagaggat
gagttagaagaggaatattctccagataatgatgataaagatgatgaagattttgaacct
gcatcaaacaggaggagaaaacggaacgttgctaagaaactagatataaaggaaaagaac
tcactggttctgagccaaaagagcaaaacaatgattgagaccaagttttcttctaaacac
agtattatgagatatacggttaatctgagagcaagagaaagtaaggtacctgaagtacaa
aatgtgaaaaacaatctaccgagaaaaaaagttgttgatgcaaacaatagtgatgtattt
gacttcatagcatctccaactaaacctaagcctctagttggtcgaatagccagagcagtt
aaaaagcaaactatagaatcctataataaacaatggagtctaagaaacagaaattgtaca
aggcgtactgctgataaagatggtgacgctggtgaaaatgaaaaaagagtatccttcagg
gaagtggatgaaagtgtatccaggcaacaagatgataagtatgatggcagtcttcaggtt
gaaaaagagaatacagagaataaggaagaattaggtgcatctgatcaatcagtgagaagg
aacgtctctggtgaaaacatcaataagcagcatatacttagaaagaggttgagtgaagaa
aatgctgatgatataaccgcagagaagttattaaaaccaggtgtagagatcacaggtcat
tcaaaaagaccccaaaggaaagggagaagaagccacgagaatacccctgcaactggaaca
cgtaaatcagtatctccaaaatctagtttatcatcaccagttggtagggatattaacact
cctgtgagaagaacacgtagatcaacttcccctggttccagtctgtcttcaccaccaggt
atatgcagtaaatcccctggtaataaaataaagagaaatgctaagggggaaacagcttta
catattgcctcaattaagggtgacgcgaaaacagtgaaagaattattggaatctggtttt
gagcctaatcttaaagacaatgctggttggacacctttgcatgaagcttgtaaccatggt
tacatagagattgtgacttcgctcctggatcatggggccttcatcaacactccaggttat
gagaatgattcgccattacacgacgctttgtacaacagacagctcgatattgtcaagtta
ttggttcagcggggagcatctttggatgtcagaaatattcatggattgacaccctgggac
gttgccaaaaatgatgatttgagaaaagcactgaacactgtgcctgtgtctatcacacca
cagatgtcctcgccaaagtttgaaaccatgtgtcgatctaaaatggtagatattgtcata
gttggtactggtctaaagagagagcagaaagcaaagttggatcactgtgctaaattactg
aagggcaaggtgttggatgagtttgatgactcagtcagtcacgttgtaactagttgtaat
gaagatgggcagtgtcccagaactatgaaatatttacaggcaatccttcatggaaaatgg
attgttagttttgattgggttacaacctgtctaaagaagcaacaactggtggaagaacag
tactttgaagtgaccggcaccgtaactcatccttttagtctcggaccacgtaaagcaaga
ttgaaccatgaacaacagtatcctggacttttcaacggctgtcatttctacttccatggc
aaatttaattcacctacgccagtgaaagaagacttgaaccagttagtaaagtctggagat
ggtaaaatattactacgtgaaccaaagatggatgactgtaacagcagccaggaagtaccg
taccatgctacaccaaactctgatctatcggagtgcacacactatattatacatgatcat
gatgtgcaaaagccaccaagcaaaatacggtcaaaaaagttacgatcagcatcagtaaag
tggctgatggattctatctctcagtttacattgctggatatcacagactag
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