Seriola lalandi dorsalis (Yellowtail amberjack): 111654966
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Entry
111654966 CDS
T06058
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111654966 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111654966 (hdac6)
04131 Membrane trafficking [BR:
slal04131
]
111654966 (hdac6)
03036 Chromosome and associated proteins [BR:
slal03036
]
111654966 (hdac6)
Enzymes [BR:
slal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111654966 (hdac6)
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111654966 (hdac6)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111654966 (hdac6)
Membrane trafficking [BR:
slal04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111654966 (hdac6)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
111654966 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
111654966
NCBI-ProteinID:
XP_023261933
Ensembl:
ENSSLDG00000006702
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MQSGGSEMQSGPDPPGSGLKSVRRSPRLSPQGSSSKGKEEKKRGNSLQEVKRKGRMERSR
EDTEEDLNSRLQMLDLSSRSAASGTGLVYSETFTHHKNLWEPSHVESADRVTSIMEELER
QDLLSHCIRVEPREATEEELLLVHMKHYVDVMRSTQAMSESELHTLSEKYDCVYIHPESF
QVCLLAVGSVLQLVDQVMTSELRNGFAVIRPPGHHAQANQANGFCVFNNVAIAARYAQIT
HSVSRVLIVDWDVHHGQGIQYQFQEDPSVLYFSVHRYEQGSFWPHLPESDSQFVGSGRGE
GRNINLPWNQTRMTDADYIAAFQQLLLPVAYEFQPQLVLVSAGFDAAVGDEKGEMCVSPQ
CFHALTHMLMSLAEGRLILALEGGYNLQSTAEGAAACVSALLGGAVPPLTPPTAPSDSAL
QSISQTVTALYPHWASLQVLEGSSLAEGRVIRATTNEESTKQNSPAPSVATTTGLVYDER
MMEHLNMWDRHHPEQPQRISKIFSRHQQLGLVDRCQRIPARLATEEELTMCHSVQHIEQM
RATAVMKPRDLHKLSEEFNSIYINNQSFKSAQLSAGSCFSAVERILRGQVSNGVAIVRPP
GHHAERDSPCGFCFFNTAALAARHAQKISHHAPLRVLILDWDVHHGNGTQHMFEDDDSVL
YISLHRYDNGTFFPSSEDAAPDRVGVARGAGFNVNVAWSGGRMGDSDYLAAFHHVVMPIA
TEFNPGLVLVSAGFDAARGDPLGGYNVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSI
SDSMAMCTSVLLGDPPPSLVTPFPPPHHSAVASINEVIRHHAPYWRSLRIHITESVRASL
PSPKHRGKRSSKGKGRKSEQRTSDKPPLPPTGPGDTTIERNLDQLAEGLASLDISQTSAN
HTPATSTPVGGARPKVRLSPEKVTCEGEVKAESNAATPEKSQSADSTPSQTQTVAMAASE
LAAIGDEAAGGAGMEGEAEGACGWSRPETNVELLCGGQTDGSTLYVVDPLSWCPHLDAVK
PLPPSSIDVHLPCQDCGSDAENWICLTCYQVFCGRYVNEHMVTHGAVSEHPMVLSFSDLS
VWCYLCEAYVHNQILFEAKNAAHCAKFGEEIPPWS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcggtggatcagagatgcagtctggaccagatcctccaggatctggactgaag
tcagtcagaagatctcctcgtttgtctcctcagggcagcagcagtaaaggaaaggaggag
aagaaacgaggaaacagtctgcaggaggtgaagagaaaagggaggatggagaggagcaga
gaggatacagaggaggatctgaacagcagactgcagatgctggacctatccagcaggtca
gcagccagtgggacaggtttggtttactcagagaccttcactcatcataagaacctgtgg
gagcccagtcatgtagaaagtgcagacagagtgacgtccatcatggaggagctggagaga
caagacctgctgtctcactgcatcagagtggagcccagagaagctacagaagaagaactg
ctgcttgttcacatgaaacattatgtggatgtgatgaggtcgactcaggcgatgtcagag
agtgaactacacactctttctgagaaatacgactgtgtttacattcatcctgagtccttc
caggtgtgtttgttggcggtgggctcagtcctccagctggttgatcaggtgatgacctct
gaactcagaaatggattcgctgtcatcagacctccaggtcatcatgctcaggccaaccag
gccaacggtttctgtgttttcaacaatgtggcaattgcagctcgatacgcccagatcaca
cactcagtcagcagggtgttgatagtggactgggatgttcatcatggtcaggggatccag
taccagttccaggaggaccctagcgtcctgtactttagtgtccataggtatgagcagggc
tctttctggccccacctcccagagtctgacagtcaatttgtcggtagtggacggggcgaa
ggaagaaacatcaacctgccctggaaccagacaaggatgactgacgctgattacatcgct
gcttttcaacaactgctgctgcctgtagcctatgagtttcagcctcagctggttctggtc
tctgctggattcgatgctgcagtcggagatgagaagggggaaatgtgtgtgagtcctcag
tgcttccatgctctgactcacatgttgatgagtttggctgaaggtcgactcattctcgct
ctcgagggaggttataacctgcagtccacagcagagggcgctgcagcctgtgtcagtgct
ctgctgggaggagccgttcctcctctgactcctcccacagctccatctgacagtgctctg
cagtccatctcccagacagtcactgctctgtatccacactgggcctctctacaagtactg
gaaggcagctcattggctgaaggcagagtcatcagagcaacaaccaatgaggagagcaca
aagcagaacagccctgccccctctgttgccacaacaacaggtctggtttatgatgagagg
atgatggagcacctgaacatgtgggacaggcatcatcctgaacagcctcagaggatctcc
aagatcttctccagacatcagcagctgggattggtcgatcgttgccaacggataccagct
cgcttagcaacagaggaggagctgaccatgtgtcacagtgtgcagcacattgagcagatg
agagccacagcagtgatgaagcccagagatctgcacaaactaagcgaagagttcaactca
atctacatcaacaaccagagcttcaagtctgctcagctgtctgctgggagctgcttcagt
gctgtggagaggatcctgagaggacaggtgagtaatggcgtggccatcgtccggcctcct
ggtcatcatgcagagagagactctccttgtggtttctgcttcttcaacaccgctgcactc
gccgctcgccatgcccagaaaatctcccatcatgcaccgttgagagtcctcatcctagac
tgggatgttcaccatggcaacgggacacagcacatgttcgaggatgatgacagcgttctg
tacatctccctccatcgctatgacaatgggacattcttcccgtcttcggaggatgctgcc
cccgaccgggtgggcgtggccagaggggcggggtttaacgtcaatgtggcatggagtgga
ggaagaatgggtgactctgactaccttgctgcttttcaccacgttgtcatgccaattgct
actgagtttaaccctggtctggttctggtgtcggctgggttcgatgcagctcggggggat
ccgctgggtggatataatgtgaccccggagggatatgcccaccttacacacctgctgatg
tcactggctggggggagggtcctactcatcctggagggaggctacaacttgtcatccatc
tctgactccatggcaatgtgcaccagcgtgttgctaggagaccctcctccatccctggtg
acgcccttcccccctccccatcacagtgctgtggcgtcgatcaatgaggttatccgacac
cacgccccctactggaggtccctgaggatacacatcacagagtctgttcgggcttccttg
ccatccccaaagcatcgtgggaaacgtagttctaaaggaaaaggcaggaagtcagagcag
agaacctcagacaaacctccactgccccccacaggaccaggcgacaccacgatagagcgc
aatcttgaccaactcgctgagggactggccagtttggacatcagtcagacctcagccaat
cacactcctgctacatccactccagtgggcggggccaggccgaaggtacgcctgagccca
gagaaggttacctgtgaaggtgaagtgaaggcggagtctaatgcagccacacctgagaag
agccaatcagcagacagcactccatctcagactcagactgttgccatggcagcgtcagag
ttggctgctattggtgacgaggctgctggtggagcggggatggagggtgaggcagaggga
gcgtgtggttggtcgaggcctgagacgaatgtggagctgctgtgtggaggacagacagac
ggatctactctgtatgtggtcgaccctctgtcctggtgtcctcacctggatgccgttaag
cccctccccccctcgagtatagacgtccacctgccgtgtcaggactgtggatccgatgct
gagaactggatctgtctcacctgctaccaggtgttctgtggtcgttatgttaatgaacac
atggtgactcacggtgctgtgtctgaacacccgatggttctgagcttctctgatctctct
gtgtggtgttacctgtgtgaggcctacgtacacaaccagattctgtttgaggctaaaaac
gctgctcactgtgccaagttcggagaggagatccctccatggagctaa
DBGET
integrated database retrieval system
