Sander lucioperca (pikeperch): 116045497
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Entry
116045497 CDS
T07345
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116045497 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116045497 (hdac6)
04131 Membrane trafficking [BR:
sluc04131
]
116045497 (hdac6)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116045497 (hdac6)
Enzymes [BR:
sluc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116045497 (hdac6)
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116045497 (hdac6)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116045497 (hdac6)
Membrane trafficking [BR:
sluc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116045497 (hdac6)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116045497 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
116045497
NCBI-ProteinID:
XP_031149014
Ensembl:
ENSSLUG00000001926
LinkDB
All DBs
Position
12:18606074..18644408
Genome browser
AA seq
1105 aa
AA seq
DB search
MQSGSDPPGPKSVRRSPRLSPQCSSSKGHEERKGGGLQEAKRRGKMERSREEDEELSDRL
QTLDLSSRTAARGTGLVYSDIFTHHENLWDSSHPESPDRVTCIMEELQRQDLLSHCIRVE
PREAAEEELLLAHSKDHVDLMKSTQAMTESELQTLSEKYDSVYLHPESFQVSLSAVGSVL
QLVDQVMTSELKNGFAVIRPPGHHAQSNLANGYSIFNNVAIAARYAQKRHSVHRVLIVDW
DVHHGQGIQYLFQEDPSVLYFSVHRYEHGAFWPHLSESDCRFVGSGRAEGRNINLPWNKT
GMTDADYIAAFQQLLLPVAYEFQPQLVLVSAGFDAAVGDPKGEMCVSPQCFHVLTHMLMS
LAEGRLVLALEGGYNLQSTAESAAACVRALLGGACPPLTPPTAPSDSALQSISQTVTALY
PHWASLQTLEGGPLADRRVSRATTNQQSTKQSGPAPSVATTTGLVYDERMMEHMNMWDRH
HPEQPQRIFKIFSKHQQLGLVDRCQRIPARLATEEELSRCHSVQHIEQMKATAAMKPRDL
HKLGLEFNSIYINNQSFQSALLAAGGCFAAVESVLTGQVSNAAAIVRPPGHHAERDSPCG
FCFFNTAALAARHAQKISPDAPLRVLILDWDVHHGNGTQHMFEDDDSVLYVSLHRYDNGT
FFPSSEDAAPDRVGVSKGAGYNVNVAWNNGRMGDSDYLAAFHSVIMPVATEFNPGLVLVS
AGFDAARGDPLGGYQVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSISDSMAMCTSVL
LGDPPPSLVTPLPPPHHSAVATINSVIRHHAPYWKSLRIHIPESVRASLPSLKHRGKRSS
KGKGRKSEPSSTDKPPLPPTGMEDTTTERGLEQLTQGLASLDISQANHTSATSTPVGGAR
PKVRLILTCEVEVKAEPGDVKAEPVEVTPEQSQSAASTLPQPQAVAVAASESVAPGDSTA
GGAGAEPETEGACGWSKPKTSLELTCGGQTDTPLYVVDPLSWCPHLDAVKPLPSPGIDVF
QSCQDCGSDAENWTCLTCYQVFCGRYVNEHMVTHGVVSEHPMVLSFCDLSVWCYLCEAYV
HNQILFEAKNAAHCAKFGEEIPPWS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggatcagatcctcccggacccaagtcagtcagaagatctcctcgcctgtct
cctcagtgcagcagcagtaaaggacacgaggagaggaaaggaggaggtctgcaggaggcg
aagaggagagggaagatggagagaagccgagaggaggacgaggagctgagcgacagattg
cagacgctggatctgtccagcaggacagcagccaggggaacaggtctggtgtactctgac
atcttcactcatcatgagaacctgtgggactccagtcatccggagagtccggaccgagtg
acgtgcatcatggaggagctgcagagacaggacctgctgtctcactgcatcagagtcgag
cccagagaagctgcagaagaggagctgctgctcgctcactcgaaagatcacgtggatttg
atgaagtcgactcaggcgatgacggagagtgaactacaaactctgtctgagaaatacgac
tctgtttaccttcatcctgagtccttccaggtgtctctgtctgcggtgggttcggtcctc
cagctggttgatcaggtgatgacctctgagctcaagaacggattcgctgtcatcagacct
ccaggtcatcatgctcagtccaacctggccaacggttactctattttcaacaacgtggcg
attgcagctcgatacgctcagaaaagacactcagtccacagggttttgatagtggactgg
gatgttcatcacggtcagggcatccagtacctgttccaggaggaccccagtgtcctgtac
ttcagtgtccacaggtatgagcatggggctttctggcctcacctgtcggagtctgactgt
cggtttgtcggcagcggacgagctgaaggcagaaacatcaacctcccctggaacaagacg
gggatgacagacgccgattacatcgcagcttttcaacaactgctgctgcctgtagcctac
gagtttcagcctcagctggttctggtctctgctggatttgatgctgcagtcggcgatcca
aagggggagatgtgtgtgagtcctcagtgtttccatgttctgactcacatgttgatgagt
ttggcagaaggtcgacttgttctggctcttgagggaggttataacctgcagtcgacagca
gagagcgccgcagcgtgtgtcagagctctgctgggaggagcctgtcctcctctgactccg
cccaccgctccatctgacagtgctctgcagtccatctctcagactgtcaccgctctgtat
ccacactgggcttctctgcagacactggaaggtggcccattggctgacaggcgtgtcagc
agagcaacaaccaaccagcagagcacaaagcagagtggccccgccccctctgttgcaact
acaacaggtctggtttatgatgagaggatgatggagcacatgaacatgtgggacagacat
caccctgaacagcctcagaggatctttaaaatcttctccaaacatcagcagctaggattg
gtcgatcgttgccaacggataccagctcgcttagctacagaggaggagctgtccaggtgt
cacagcgtgcagcacattgagcagatgaaggccacggcagcgatgaagcccagagatctg
cacaaactgggactcgagttcaactcgatctacatcaacaaccagagcttccagtcggct
ctgctggctgccggaggctgcttcgctgctgtggagagcgtcctcacaggacaggtgagt
aacgccgcggccatcgttcgtccacctggtcatcacgcagagagagattctccgtgcggt
ttctgtttcttcaacacggcagcgcttgccgctcgccacgcccagaaaatatcccccgat
gcaccgctgcgggtcctcatcctggactgggacgttcaccacggcaacgggacacagcac
atgttcgaggacgacgacagcgtcctgtacgtctccctccatcgctacgacaacgggacg
ttcttcccgtcttcagaggacgccgcccccgacagggtgggcgtgtccaagggggcgggg
tacaacgtcaacgtggcgtggaacaacgggcggatgggcgactcagactacctcgcggcc
ttccacagcgtcatcatgccggtcgccaccgagtttaaccccggtctggttctggtgtcg
gccgggttcgatgcagctcgcggggatcccctgggtggatatcaagtgacccctgaggga
tacgcccacctcacacacctgctgatgtcattggccggggggcgggtcctactcatactg
gagggaggttataacttgtcatccatctctgactccatggcgatgtgcaccagcgtgttg
ctaggagaccctcctccctccttggtgacgcccctccctcctcctcatcacagcgccgtg
gcaacgatcaactccgtcatccgacaccacgccccctactggaagtcgctgaggatacac
atcccagagtctgtgcgggcgtctcttccctccctgaagcatcgtgggaaacgtagttct
aaaggaaaaggcaggaagtcagagccgagcagcacggacaagcccccgctgccccctaca
ggaatggaggacacaacgacggagcgcggtctggagcaactcactcagggattggccagt
ttggacatcagtcaggccaatcacacttctgctacgtccacccctgtgggcggggccagg
ccgaaggtccgcctcattctcacctgtgaagtggaagtgaaggcggagccaggggatgtg
aaggcggagccagtggaagtgacacctgagcagagccaatcagcagcgagcacgctgcca
cagcctcaggctgttgccgtggcagcgtcagagtcggttgcccccggagactcaactgca
ggtggagcgggggcggagccagagactgagggagcgtgtggttggtcgaagccgaagacg
tctctggagctgacgtgtggaggacagactgacacccctctgtacgtggtggaccccctg
tcctggtgtcctcacctggacgccgtgaagcccctcccatccccaggtatcgacgtcttc
cagtcgtgtcaggactgcggctcggatgctgagaactggacctgtctcacctgctaccag
gtgttctgcggccgctacgttaacgagcacatggtgacgcacggcgtcgtgtctgaacac
ccgatggtgctgagcttctgcgacctgtctgtgtggtgctacctgtgtgaggcctacgta
cacaaccagattctgtttgaagctaaaaacgctgctcactgcgccaagttcggagaggag
attcctccatggagctga
DBGET
integrated database retrieval system
