Saccharomycodes ludwigii: SCDLUD_002755
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Entry
SCDLUD_002755 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slud01009
]
SCDLUD_002755
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_002755
04131 Membrane trafficking [BR:
slud04131
]
SCDLUD_002755
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_002755
Enzymes [BR:
slud01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
SCDLUD_002755
Protein phosphatases and associated proteins [BR:
slud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SCDLUD_002755
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
SCDLUD_002755
Membrane trafficking [BR:
slud04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SCDLUD_002755
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
SCDLUD_002755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
70108072
NCBI-ProteinID:
XP_045935199
LinkDB
All DBs
Position
III:complement(1119339..1121576)
Genome browser
AA seq
745 aa
AA seq
DB search
MDSLSNNDTESNSEQQQKNQGKVNKELTETHLISTNNDNDTRKKRKLTIVPKNTKSKLHY
VPLKTGVCYDVRMRYHAKIYTSYFEYIDPHPEDPRRIYRIYKILCENGLIVDPSLSIDEN
TDDVGEWMLRIPIREATDDEILEVHTLEHLNFIKSLPKMEREDLLKKTATGDSVYFNNDS
YLSAKLSCGGAIEACKAVIEGKVKNSLAIVRPPGHHAEPQQAGGFCLFSNVAVAAKAILK
AYPESVRKILILDWDIHHGNGTQKAFYEDNRVLYISLHRFELGKYYPGTKWGGHDQCGEK
DGEGFNCNIPWPCGGIGDAEYIYAFQRIIMPMAQEFQPDFVIISSGFDAADGDTIGQCNV
TPSCYGQMTHMLKSLANGKLCVILEGGYNLDAIARSALDVATVLIGEPPNEISNKNSVVP
KPEIIKTVAEVIQQQSKYWKCFRSPYGNECLDKTQPINEKLLSKNFPLQNSIRDHQYELL
ADEYNFFSLPLLNLNTTNFILSPHTVLATTFKPVEEVSIFDSTDLIIHIHDTPDMWGQAD
PLTGVLNASTTIIIDNSIQLIKWCKEKNYHYIDINIPHSLFETDNYSTIMASQEVMIYLW
NNYLQHFPNLQKIAFVGIGDSCSGLVHLLGHIDTRETVKCCISFIDKTSLKGIVPLIDES
LVEWYYKNSLVFASKNHSCWLSSTKPRKKFGRVLKTRSDGMNNVFDEGFDEATDFILDSF
EEFDDDEDDDEEEEEEEKIKRENGV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggattctttgtctaataatgatacagaatctaattctgaacaacaacaaaaaaatcag
ggtaaggtcaataaagaacttactgaaactcaccttatatccactaacaacgacaatgac
actcgcaagaaaagaaaattaactattgttcccaaaaatactaaatccaaattacattat
gtgcctttaaagactggagtctgttacgatgttagaatgagatatcacgctaaaatttat
acctcttattttgaatatatcgatcctcatccagaggatcctagaagaatatataggatt
tacaaaatattatgcgaaaatggtcttattgttgatccaagcctaagtattgatgagaat
actgatgatgtcggtgaatggatgctgagaattccgattagagaagccacagacgacgaa
attttggaagttcatacattggaacatttaaactttattaaatcgttgcccaaaatggaa
cgcgaggacttgttgaaaaaaactgcgacaggcgattccgtgtattttaacaacgattca
tatttaagtgctaagttgtcatgtggtggtgcaattgaagcttgtaaagctgtgatcgag
gggaaagttaaaaattcgttagccatagttagacctccaggtcatcatgcagagccacaa
caagctggcggtttttgcttattcagtaatgttgccgtggcagccaaagcaatattgaaa
gcatatcctgaaagtgttcggaaaatattaattttagactgggatattcatcacggcaac
ggcactcaaaaggcattttatgaagacaatcgtgttttatatatctcattgcatagattc
gaactggggaagtattatccaggtaccaagtggggtggacatgaccaatgtggagagaag
gatggagaagggtttaattgtaatattccatggccatgtggcggtattggtgatgctgag
tatatatatgcctttcaaagaatcattatgccaatggcgcaagaatttcagcctgatttt
gtaattatatcatctggctttgacgccgctgatggtgacactataggtcaatgtaacgtt
acaccgagttgttatgggcaaatgacccacatgctaaaatctttggccaatggcaaatta
tgtgttatattagaaggtggttacaatttggatgctattgcaagaagcgccttagatgta
gcaacagttttaatcggtgaaccaccaaatgaaatcagcaacaaaaatagtgttgtgcct
aagcctgaaattatcaaaacagtagcagaggtcattcaacagcaatctaaatactggaaa
tgctttcgtagtccctacggaaatgaatgtttagataaaacacaaccaatcaacgaaaaa
ttactctctaaaaattttcccctacagaattctataagagaccatcaatatgagttattg
gctgatgaatacaatttcttttcattacccctattaaatctaaatacaacaaatttcatt
ctatcaccacatactgttttggcaaccacttttaagcccgttgaagaagtcagtatattt
gattcgacggatctaataattcatattcatgatactccggatatgtggggacaagcagat
cctttaactggtgttttaaacgcatcaactaccattataatagacaactccatacaatta
ataaaatggtgtaaagaaaagaattatcattatatagacataaatattccacactcgtta
tttgaaacggataactattccacaattatggcatcacaagaagtaatgatatatctatgg
aataattatctacagcatttccccaacttgcaaaaaattgcttttgtgggaataggtgat
tcgtgttccggtttagtgcatttgttggggcatatagacactagagaaacagttaaatgc
tgtatttccttcattgataaaacatctttaaagggaattgtccccttgatagatgaatcc
ctggtggaatggtattataagaattcgctagtttttgcatctaaaaaccattcgtgttgg
ctatcctctacaaaacctaggaagaaatttgggagggttttaaaaacaagaagtgacggt
atgaataatgtctttgatgagggatttgatgaagctactgattttatattggatagtttt
gaagaatttgatgacgatgaagatgacgatgaagaagaagaagaggaagaaaaaataaaa
agggaaaatggtgtttaa
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