Scophthalmus maximus (turbot): 118282768
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Entry
118282768 CDS
T09850
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118282768 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118282768 (bard1)
04121 Ubiquitin system [BR:
smau04121
]
118282768 (bard1)
03036 Chromosome and associated proteins [BR:
smau03036
]
118282768 (bard1)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118282768 (bard1)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
118282768 (bard1)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
118282768 (bard1)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118282768 (bard1)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
118282768 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_3
Ank_4
Ank_5
BRCT_2
BRCT
zf-RING_5
zf-RING_10
Prok-RING_4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
118282768
NCBI-ProteinID:
XP_035460042
EnsemblRapid:
ENSSMAG00025022505
LinkDB
All DBs
Position
14:12885462..12906257
Genome browser
AA seq
810 aa
AA seq
DB search
MDGDVPARTDDWRNTKEAVDNFRRLLLCSKCSNLMKEPVCLGTCEHMVCRSCAGPQAGDG
CVVCHSPAWVKDIQINRQLSSIIQLFCGLDSLINPMDPPDSSVPEIQTQPASPVSKHKKN
FKIWFSPRSRKVRCTVERPSEVTAPDNRSTGETAAAQPDTITAQHQDLSVFNFTSSSQDS
GSSSQRRNTENVNRKKRSTKTNAASRKALARGATRTTRKHTGQKMKKTRLEAINKQWGVT
EEVDTPEEKEEHCAEGTRRSSKRVSFLSPAVISDEPQPEVPQGSSADLSPGKSNARERHS
GGSTTEMIYHASADQNTSDSVIQQNTPSSIDLEPNDDPEKQVNVSTPKNSSKRTRLVEKI
GPLETTPKRPRVSPGRRRKSPGQISPVVLIRPFLTSPRNEKSNNNICREERGQSPSDLAA
VGRKSPGTPGAALGRPSSGSPAVMKRNHKGETLLHLAAIKGDVEAVKELLDQGADPNLKD
NAGWTPLHEACNLGHVEVVEALISRGALLNTPGYENDSPLHDAVRNGHPAIVKLLLQHGA
SQNVLNLYGKRPADYAVSLEMREIFQEASEGTQCANPSVSPSASLSVTSNCARRDEMVMF
VASKLCHPAQLQLANLGQLLGGRMADTFSGSVSHVVVPEGHMPTTFSTLLGLLAGCWVVR
FSWVEACLQAGKWMPETEHEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKAPAKDKLT
KLLREGGGQLLSRQPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPLGPHKPTVVRR
GKVWSAPSTWIIDCIAAFRLLPVSEPQALL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacgtccccgcgcggacagacgactggaggaacactaaggaggcggtcgac
aactttcgccgcctgctgctttgctccaaatgttcaaatttgatgaaggaacctgtgtgt
ctaggaacgtgtgagcatatggtgtgcaggtcctgtgctggcccccaggcaggagatggc
tgcgtggtgtgtcacagccctgcatgggtgaaggacatccagatcaacaggcagctgagc
agcattatacagctcttctgtggcttggactccctgatcaatcccatggacccaccagac
tcctctgttccggagattcagacacagcctgcgagccctgtctcaaaacacaagaagaac
ttcaagatctggttcagcccccgcagccgcaaggtacggtgcacagtggagaggccctca
gaggtcaccgcgccggacaacaggtccactggagaaacagctgcagcacagccagacacg
attactgctcaacaccaggacttgtcagttttcaatttcacctcgtcctcccaagactcc
ggctcctcttctcaaagacgcaacaccgaaaacgttaacaggaagaagaggtcaaccaag
acaaatgccgccagcaggaaggcattggcacggggagccaccaggaccacacgaaagcat
accgggcagaaaatgaagaagacgagactggaggccatcaataaacaatggggggtcacc
gaggaggtagataccccagaggaaaaggaggagcactgtgctgaagggacaaggagatcc
agtaaaagggtttccttcctaagccctgcggtcatctctgacgagcctcagcctgaagtg
ccacaggggagttctgctgacctcagccctggaaagagcaacgcgagggagagacactca
ggaggcagcaccactgaaatgatttaccatgcctcggctgatcaaaacacgtctgacagt
gttatccagcaaaacacaccgtcctccattgacctcgagccaaatgatgatcctgaaaaa
caggtgaacgtttctactccaaagaattcctcaaaaagaaccagattggtggagaaaatt
ggcccattggagaccacgccaaaaaggcccagggtctcaccaggccggaggagaaaatcg
ccgggtcagatatcgccagtcgtcctcatccgtccatttttgactagccccaggaatgaa
aagagcaacaacaacatctgcagagaagagcgaggacagagcccgtctgatttagctgct
gtgggccgaaaatctcccggtactccaggtgcagctcttgggcggccgagctcaggaagc
cctgcagtcatgaagaggaaccacaaaggggagaccctgctacatctcgctgctatcaag
ggagatgtagaagctgtcaaggagctgctggaccagggggccgaccctaacctgaaggat
aacgctgggtggacacccctgcacgaagcatgtaacctgggtcacgtggaagttgtggag
gcgctgatctcgaggggagctctactgaacacacctggctatgaaaacgattctccactg
catgacgccgtgaggaacgggcatccagccattgtcaaactgctgctgcagcatggagcc
tcacagaacgtactaaatctgtatggaaaacgtcctgcagattatgcggtgagtctggag
atgcgggagattttccaggaagcctccgaaggaacccagtgtgctaatccgtctgttagc
ccctcagccagcctctctgtgacgagtaactgtgcgaggagggatgaaatggtgatgttt
gtggccagcaagctgtgtcatccggcccagcttcaactggccaacctgggacagctactg
ggagggaggatggctgacaccttttctggctcagtaagccacgtcgtggtgccagaagga
cacatgcccaccactttctctaccctcctgggtcttctcgctggctgctgggttgtcaga
ttcagctgggtggaggcatgtctgcaggcaggcaagtggatgcccgaaactgagcatgag
gcaggagaaggcccccagcgcagtcgcatcaacagatgtagcctgctgccaccactcttc
gatggctgcttcttcttcctgctgggctccttcaaggcgccggccaaagacaagctcacc
aagctgctgcgggagggaggaggtcaactcctaagccgacagcccaagcccgatagcgat
gtgacacaaaccctgagcgccgccgcctaccacgccctgcccggctctgaccaggccctc
tgcacccagtacatcatcttcgaccccctgggccctcacaagcccacagtggtcagacga
ggcaaggtatggtcagctccctccacctggatcatcgactgcatcgcagccttccggctc
ctccctgtgtcagaacctcaggcattgctctag
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integrated database retrieval system
