Salvelinus namaycush (lake trout): 120024042
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Entry
120024042 CDS
T07522
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
snh01100
Metabolic pathways
Module
snh_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
120024042
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120024042
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
120024042
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
120024042
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120024042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
ADIP
MscS_porin
TBK1_CCD1
TPR_MLP1_2
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
120024042
NCBI-ProteinID:
XP_038824070
UniProt:
A0A8U0PFK2
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Position
Sna29:complement(10386333..10430883)
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AA seq
917 aa
AA seq
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MMQRNGGGVGPGGQPWLLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGGPDKRIFG
PRPGGELCEAKHVQDLCRIRESVSEELLQLEAKRQELNGEISRLNLRIEACKRSIDSAKQ
DLLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKDDPGLPPPKSARACRLRSCFDYA
RCPLTSGFPVYVYDTASYPWGESLDPLVKQAFTTSVKSSIYVTNNPSIACLYVVLVGELQ
ETPSSPLPAPLELEKQLKALPYWRSDGHNHLLVHLSRKSMTQNFLYNVSTGRAAVAQSTF
LEQQYREGFDLVVSPLVHALSEPNFLEVPPQVPVKRKYLFTFQGEKVESLRSSLQEGPHQ
SFEEEMEGDAPADYDDRIIGTLKAVQDSHLDQVLVEFTCKTPRPSLPTEWALCGEREERL
EVLKASTFALVISPGDCQLVASAGSSMRLFEALEVGAIPVVLGDHARLPYHMLIRWSEAA
IMVPKPRITELHFLLRSLSDNDLLAMRRQGRFLWETYFSTSENVLGTILASVRTSIQVPA
APIREEPAQEIPHKAGKMAGTDANLADNGDLDLGPVETEPPYASPRFLRNFTYTSANTYQ
TWNRAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVPREQ
FTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVRTEK
NSLNNRFLPWDAVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRFHAWDVNH
QSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSH
ITRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSV
LFKTRLPHDKTKCFKFI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcgtaacggtggtggggtggggcccggcggccagccgtggctgctgcggcgc
gtgcgcctcacctggctcagcttcatgctcttcttcatcctggttttcttcccactcatc
gcccactactacctcaccaccatcgacgaggcgggcggccccgacaagcgcatcttcggc
ccgcgtcccggtggcgaactgtgcgaggccaagcacgtgcaagacctgtgccgcatccgt
gagtcagtcagtgaggagctgctacagctggaggcaaagcggcaggagctgaacggggag
atctcccggctcaacctgcgcatcgaggcgtgcaagcggagcatcgacagtgccaagcag
gacctgctgcagctgaagaatgtcatcagccagacagagcactcgtacaaagagctgatg
gcccagaaccagcccaagctctctctgcccgtgaggttattacccgacaaggacgacccg
ggcctgcccccgcccaagtctgcccgtgcctgccgcctgcgctcctgcttcgactacgcc
cgctgcccgttgacctctggcttccctgtgtacgtctatgacacggcctcctacccctgg
ggcgagtccctggacccattggtcaagcaggccttcaccacctcggtaaagagcagcatc
tatgtgacgaacaaccccagcatcgcctgtctgtatgtggtgctggttggggagcttcag
gagactccctcctcccccctcccggctcccttggagctggagaagcagctgaaggccctg
ccctactggaggtccgatggacacaaccacctcctggtccatctttccaggaagtccatg
acgcagaacttcctgtacaatgtgagcacgggccgagcggcagtggcccagtccaccttc
ctggagcagcagtaccgcgagggctttgacttggtggtgtccccgctggtccacgccctc
tctgagcccaacttcctggaggtgccgccccaggtgcccgtcaagaggaagtacctgttc
accttccagggcgagaaggtggagtctctgcgaagtagcctgcaggagggaccgcaccag
tcctttgaggaggagatggagggagatgcgccagccgactacgacgaccgcatcatcggc
acactcaaggcagtgcaggacagccacctggaccaggtgctggtggagttcacctgtaag
accccgcggcccagcctgcctaccgagtgggctctgtgtggcgagagggaggagcggctc
gaggtcctcaaggcctccaccttcgccctggtcatctcccccggggactgtcagttggtg
gcctcggcaggcagtagcatgaggctgtttgaagccctagaggtgggggccatccctgtg
gtgcttggggaccacgctaggctgccctaccatatgctgatccgctggagcgaggcagcc
atcatggtgcctaagccccgcatcaccgagctgcatttcctgctgcgcagcctatcagac
aacgacctgctggccatgcgacgacagggccgcttcctgtgggagacctacttctccacc
tcggagaatgtactgggcaccatcctggccagcgtccggaccagcatccaggtgcctgcc
gcacccatccgcgaggagcccgcccaggagatccctcacaaagcaggcaagatggccggc
acggacgccaacctggccgacaacggtgacctggacctgggccccgtggagacggagcca
ccctacgcctcgccacgcttcctccgcaactttacctacacgtcagccaacacctaccag
acctggaaccgtgccccgggacctttccatctgttcccccacacaccgctggaccccgtg
ctgccctcggaggccaagtttctgggctcgggcacgggcttccgccccattggcggcggt
gctgggggctcggggaaggagtttcaggcagcgctgggtggtaacgtgccccgggagcag
ttcacggtggtcatgctgacctacgagagggaggaggtgctaatgaactccctggaacgg
ctcaacgggttgccctacctcaacaaggtggtggtggtgtggaactcccccaagcctcct
tcagacgacctactgtggccagacatcggcctgcccatcgtggtggtgcgcacggagaag
aacagcctcaacaaccgcttcctgccctgggacgccgtggagacggaggccatcttgtcc
atcgacgacgacgcccacctccgccatgacgagattatgtttgggttcagggtgtggcgg
gaggccagggaccgcatcgtgggcttccccgggaggttccatgcctgggacgtcaaccac
cagtcatggctctacaactctaactactcctgtgaactgtcaatggtgctgacgggcgcc
gccttctttcacaagtactacgcgtacctgtactcgtatgtgatgcctcaggccatccgc
gacatggtggacgagtacatcaactgcgaggatatcgccatgaacttcctggtgtcacac
atcacccgaaagccccctatcaaggtgacgtctcgttggaccttccgctgccccggctgc
ccgcaggccctgtcgcacgacgactctcacttccacgagcgccataagtgcatcaacttc
tttgtcaaggtgtacggctacatgcccttactctacacacagttccgcgtggactctgtg
ctcttcaagacacgtctgccccacgacaagactaagtgcttcaagttcatctag
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