Solenopsis invicta (red fire ant): 105198605
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Entry
105198605 CDS
T03916
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105198605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soc03400
]
105198605
Enzymes [BR:
soc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105198605
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
105198605
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105198605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH_3
NTP_transf_2
HHH
Cdd1
DUF3701
HHH_2
DUF4332
Autophagy_act_C
DsrD
Motif
Other DBs
NCBI-GeneID:
105198605
NCBI-ProteinID:
XP_011163672
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All DBs
Position
8:4221916..4224265
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AA seq
337 aa
AA seq
DB search
MGKRKATSNANNPNQDLCDFLMELADYERNVSKNVYKYNAYRKAAGTLGALTERVQSGKE
AKKLPGIGEKIAKKIDEFLQTGKLQKLEDIKKDETNVSISLLARVSGIGPAKAKELVEAG
IKTLEDLKKHQNKLTHHQKLGLKYFDDFEKKIPRAEIVEIEKILKKAIKELNSAYLITIC
GSYRRGKEESGDIDVLVTHPDYISTAKNEKKKTISLKAIVECLEKKKLITDTISLGSTKF
MGVCRLSEDKDKPFRRLDIRLTFHDQYYCAILYFTGSDLFNKNMRAHALEKKYTLNEYAL
KRLTTEGLPGEAEKITSEEDVFKFLDLPYKEPKDRNV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagaaaagccacgagtaatgcgaacaatccaaatcaggacttgtgcgatttt
ttgatggaactagcggattatgaacgtaatgtcagtaagaatgtctacaagtacaatgcg
tatcgcaaagcagctggaacattaggcgccctgacggagagagtccagagcgggaaggag
gcgaagaagttacctggaataggagagaaaattgcaaagaaaatagacgaatttctacag
actgggaagctgcaaaaattagaagatattaagaaagatgagactaatgtctccattagt
ctgttggcccgagtgtctggcataggtcctgctaaggcaaaggaattagtggaagctggt
atcaaaaccttggaagatctcaagaaacatcaaaacaagctcacacatcatcagaaattg
ggactgaagtactttgatgactttgagaagaaaatacctagagcagaaattgtagagata
gagaagatattaaaaaaagctatcaaagagttgaacagcgcttacctcataaccatctgt
ggaagttatagacgcggcaaggaggaaagtggagatatcgatgttctcgtgacacatcct
gattatatatcgacagcgaaaaatgagaaaaagaagaccatatcattaaaagcaattgtc
gagtgtcttgaaaagaagaaactaattacagacacgatatctcttggatccactaaattt
atgggagtgtgtcggctatcagaggacaaagacaagccgttcagacgattagatatacgt
cttacgttccatgatcaatattactgtgccatactttacttcacgggaagtgatctattc
aacaagaatatgagagcgcatgcattggaaaagaaatatacgttgaatgaatatgcgttg
aagcgcctcacgaccgaaggtcttccaggagaagctgaaaaaattacatctgaagaagat
gtcttcaaatttctggatttaccctataaagaaccaaaggacagaaatgtataa
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