Solenopsis invicta (red fire ant): 105202516
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Entry
105202516 CDS
T03916
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105202516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105202516
04121 Ubiquitin system [BR:
soc04121
]
105202516
03036 Chromosome and associated proteins [BR:
soc03036
]
105202516
03400 DNA repair and recombination proteins [BR:
soc03400
]
105202516
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105202516
Ubiquitin system [BR:
soc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
105202516
Chromosome and associated proteins [BR:
soc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105202516
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105202516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_5
Ank_3
Ank_4
zf-RING_5
zf-C3HC4
zf-RING_6
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
BRCT
zf-RING_2
zf-C3HC4_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
105202516
NCBI-ProteinID:
XP_011169380
LinkDB
All DBs
Position
6:complement(22889360..22893058)
Genome browser
AA seq
503 aa
AA seq
DB search
MNISWTNTASALEDFVSILVCGKCGSKPESPVRITNCGHFFCHNCIKSAIKCVKCDVPVQ
PREIKSDHLISNLINNCDVIADIIHKRNLWSNVTDASNMSMDTTSSVIHMPKKQNYVSTK
NINKPNHRGETPLHVACLKRNVEQIKHLFINGANLNTKDAAEWTPLQEVVSYGYTEICAL
LLECGASPNISGFNQRRPLHEATKNNRIEEAKLLLQHNADRELCDQYGKKPIDYCKSEEM
RQLLMDFPKSPSEKVSDLNETLNKSIRTGCDKFVILASNLKHENQKLLGLVAAKHRFKIL
TTYRSSVTHVIVEANEQNVTKLTLDVLFSIIYGSWLLNSEWIQLAADMDDIANVDLELFE
INGAPTYGIPRKARQNVECQNPRLFNNCFFYFALQANTTYHIDDVRFTKDDLVRLVKDGE
GTVLTREPNPEDLKDISQVIPFHIANDQSHPLYKCTHYVIYVPGKNEPLIKYNMPHIKSL
PLIWLIECIEKFTLVSPAHLGLS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttcgtggacaaatactgctagtgccttagaagattttgtaagcattctggtt
tgtgggaaatgtggctccaaaccagagtctcctgtaaggataacaaattgtggacatttc
ttttgccataattgcattaaatctgcaataaaatgtgttaaatgtgatgtaccagtgcag
ccaagggaaataaagtctgatcatttaatatctaatcttataaacaattgtgatgttatt
gcagacattattcataaaagaaatctatggagtaatgttacagatgcatccaatatgtca
atggatacgacatcttcagtaattcatatgccaaaaaaacagaattatgtatctacaaag
aatataaataagccaaatcaccgtggagaaacaccattacatgttgcatgtttaaaaaga
aatgttgaacaaattaaacatctctttataaatggagcaaatctcaatacaaaagacgct
gccgagtggacaccattgcaagaagtagtcagttatggatataccgaaatatgtgcatta
ctattggagtgtggtgcatcacccaatatatcaggttttaatcaacgaagaccattacac
gaagctactaaaaacaacagaattgaagaagccaagttgttgttgcaacacaacgctgac
agagaattatgcgatcagtatggcaaaaagcctatagactattgtaaatcagaagagatg
cggcagcttctgatggactttccgaaatccccatctgaaaaggtatcggaccttaatgaa
acattaaataaatctattcgtacaggatgtgacaaatttgtgattcttgcatctaattta
aaacatgaaaatcagaaattacttggtcttgttgctgcaaaacatagatttaaaattttg
acaacgtatagatcgtctgttacacatgtcatagtggaggcaaatgagcaaaatgtcaca
aaattgacgcttgatgttttgttctcaattatctatggaagctggctcctcaatagtgaa
tggattcaactggcagcagatatggatgacatagctaacgtggatcttgaattgtttgaa
attaacggcgcgcccacttatggcattccgaggaaagctagacagaatgtggaatgtcaa
aatccacgtttattcaataactgtttcttttattttgctttgcaagcaaatacaacttat
catatcgacgacgtgcgattcacgaaagatgatctagtaagacttgtaaaggatggagag
ggaacagtactcactagggaaccaaatccagaagatttgaaagatatatcgcaagtaata
ccttttcacatcgcaaacgatcagtctcatcccttatacaaatgtacacattacgttata
tatgtaccgggcaaaaatgaaccgcttattaaatacaatatgccacacattaagagtttg
ccattaatatggctaattgagtgcatcgaaaaatttactcttgtgagtccagctcacttg
ggattgtcctaa
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