Solanum tuberosum (potato): 102589099
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Entry
102589099 CDS
T02981
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102589099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102589099
04121 Ubiquitin system [BR:
sot04121
]
102589099
03036 Chromosome and associated proteins [BR:
sot03036
]
102589099
03400 DNA repair and recombination proteins [BR:
sot03400
]
102589099
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102589099
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
102589099
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102589099
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102589099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-C3HC4
zf-RING_UBOX
PTCB-BRCT
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
Prok-RING_4
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_2
zf-RING_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
102589099
NCBI-ProteinID:
XP_006364566
UniProt:
M1B6E8
LinkDB
All DBs
Position
Un
AA seq
705 aa
AA seq
DB search
MAAEAQSIARFLNPLAFHIQKLGLELKCPLCLNLLTKPMLLPCDHIFCNFCVPSSTQVQC
ECPLCKHQYVDQEIRAVPHMESMISIFRSLDATCNAKVFQFQSPDAGRSLEQSPISVNAD
KSRNEQSVKAIIRSNNPSKEIHRHNEHGMPWNVVNHLSVLPSSDRKEDSKNDGYNAEEID
LNQFQQQSPGSAHSSDSNKDIVKETSELRVMKTNAAKRLVEDSSDVVPFLKKEDSSDVVE
GLMHHTVMHENVFHERDVKRQKKLSYGLPEMALQSHDHNQQRESCSRIIANSDCNLTCKL
SESSFVAHPQEVSDQHLLEGSACAFCLKSKITEGTGPMLHYANGREVVGDATSLSKAIPV
HMKCIDWAPQVYYDGEIIKNLEAELARASKLKCSGCGLKGAALGCLVKSCRRSYHMPCAF
EMQDCRWDTDNFVMLCPSHKSVKFPSEKSKSRKRAKIEARPEPAPITSERLNFWATSSDG
PKEWVLCGSALSSEEKYMLVKFANMCGATVCKSWNPSVTHVIAATDENGACTRTLKVLMA
ILGGKWILTIDWIKACIQENYPVNEEAYEVSLDNHGCFGGPKVGRLRASSNAPKLFDGLK
FYLSGDYVPAYRIDLLDLVENAGGSIIHTKEQLISQTDATQTTSSACLVVYNSDPPRGCA
FGEERNVLLQRQAKAEELAKPLGCQVIQHTWILESIATCKLVPFC
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaagctcaaagcattgctcggtttcttaacccattggcttttcatattcag
aaattgggtcttgaactcaaatgccctctttgcttaaacttgctgactaaacctatgttg
cttccctgcgaccatattttctgcaacttttgtgttccgagctcgacccaagttcaatgt
gaatgccctttatgcaaacatcaatatgttgatcaagaaataagggcagtgcctcatatg
gagagtatgatatccatatttagaagcttagatgctacttgcaatgctaaagtctttcaa
ttccaatctcccgatgctggaagatcactcgagcagtctcccatttctgttaatgctgac
aaatcaagaaatgagcaatctgtcaaagccataataagaagcaataatccgagcaaggag
attcataggcacaatgaacatggaatgccatggaatgttgtgaatcatttgagtgtcttg
ccttcgtctgacaggaaggaagactcgaaaaatgatgggtataatgcagaggaaatagat
ttgaatcaatttcaacagcagtcaccaggcagtgctcattcatcagacagcaacaaagac
attgttaaagagaccagtgaactgagagttatgaaaaccaatgctgcaaagaggcttgtt
gaagatagctcagatgtggttccatttctgaaaaaagaagatagctcagatgtggttgaa
ggtttaatgcaccacacagttatgcatgaaaatgtgtttcatgaaagggatgtgaagaga
caaaagaaactaagctatggattgccagagatggccttgcagagtcatgatcataatcaa
caaagagagtcttgttcaagaataattgccaactctgactgcaacttgacatgcaaattg
agtgaatcttcttttgttgctcatccacaagaagtttcagatcaacatcttctggaaggc
agtgcttgtgctttctgcctcaaatctaagataacagagggaactggaccaatgctgcac
tatgcaaatggcagggaggtggtgggagatgccacttcactttcaaaagccatacctgtg
catatgaaatgtattgactgggcgcctcaagtatattatgatggagagatcataaaaaat
ttggaggctgaattggcaagagcttcaaaactcaagtgtagtggttgtggcctaaagggt
gcagcacttggctgccttgtgaagtcttgtcggaggagttaccatatgccctgtgcattt
gaaatgcaggactgccgttgggatactgacaactttgtaatgctgtgtccaagccacaaa
tcagttaaatttcctagcgaaaagtcaaagtctaggaagcgtgccaaaattgaagcacgt
ccagaacctgctcccataacatccgagcgattgaatttttgggcaacatcgtcagatgga
ccaaaagaatgggttctatgcggatctgctctatcctcagaagagaagtatatgttggtc
aagtttgctaatatgtgtggcgcaactgtgtgcaagtcttggaacccaagtgtcactcat
gtcattgcagcaacagatgaaaatggtgcatgcaccagaacactgaaagttctcatggca
attttgggtggaaaatggatcctaacaattgattggataaaagcctgcattcaagaaaat
tatcctgtgaatgaagaggcttatgaagttagcctggacaatcacggctgttttggaggt
cccaaagttggtagactaagggcttcatccaatgcacctaagctatttgatggtttgaag
ttttatctgagtggagattatgtcccagcttacagaatcgacctgttagatctagttgaa
aatgctggaggttccataatccacactaaggaacagttgatttcccagactgatgctaca
caaacaactagttcagcttgtctagttgtttataacagtgatcctccacgtggttgtgca
ttcggggaggaaagaaacgttttgcttcaacgacaagcaaaggctgaggaactggccaag
ccacttggttgtcaggtcattcagcatacatggattctggagtctattgctacatgtaaa
ttggtgcctttctgctga
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integrated database retrieval system
