Sus scrofa (pig): 100144586
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Entry
100144586 CDS
T01009
Symbol
ABCB4
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc02010
ABC transporters
ssc04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100144586 (ABCB4)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
100144586 (ABCB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100144586 (ABCB4)
Enzymes [BR:
ssc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100144586 (ABCB4)
Transporters [BR:
ssc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100144586 (ABCB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
AAA_16
AAA_5
Rad17
RsgA_GTPase
AAA
AAA_29
DUF87
G-alpha
SbcC_Walker_B
AAA_14
AAA_30
AAA_7
APS_kinase
DUF815
AAA_28
nSTAND1
AAA_15
NTPase_1
Peptidase_MA_2
DUF2336
Motif
Other DBs
NCBI-GeneID:
100144586
NCBI-ProteinID:
XP_005656751
Ensembl:
ENSSSCG00000024520
UniProt:
A0A8D1DCC9
A0A286ZJ46
LinkDB
All DBs
Position
9:93171371..93262124
Genome browser
AA seq
1269 aa
AA seq
DB search
MDSRRPEGAETDFELGNNSNQDKAMKKVNLIGPLALFRYSDWQDKLFMSLGTIMAIAHGA
GLPLMMIVFGEMTDRFINIGGNFSFPVNLSLSMLNPGRILEEEMTRYAYYYSGLGAGVLV
AAYIQVSFWTLAAGRQIKKIRQEFFHAILRQEIGWFDVSDTTELNTRLTDDISKISEGIG
DKVGMFFQAVATFFAGFIVGFIRGWKLTLVIMAISPILGLSAAVWAKIISAFSDKELAAY
AKAGAVAEEALGAIRTVIAFGGQSKELERYQKHLENAKKIGIKKAISANISMGIAFLLIY
ASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGAAYVIFD
IIDNNPKIDSFSERGHKPVNIKGNLEFSDVHFSYPARPNVKILKGLNLRVESGQTVALVG
NSGCGKSTTVQLIQRLYDPDGGMVTIDGQDIRTFNVRYLREIIGVVSQEPVLFSTTIAEN
IRYGRGNVTMDEIKKAVKEANAYEFIMKLPQKFDTLVGDRGAQLSGGQKQRIAIARALVR
NPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADIIAGFDDGVIV
EQGSHKELMQKGGVYFRLVNMQTSGSQIPSEEFKVALTVEKPPMGLAPDGQKTHYILRNK
SLRNSRKYQSGLDVEINELEENVPSVSFMKILKLNKTEWPYFVVGTLCAVANGALQPAFS
IIFSEMIAVFGPGDDEVKQQKCNMFSLLFLGLGIISFFTFFLQGFTFGKAGEILTTRLRS
MAFKAMLRQDMSWFDDHNNSTGALSTRLATDASQVQGATGTRLALIAQNTANLGTGIIIS
FIYGWQLTLLLLLVVPIIAVSGIVEMKLLAGNAKRDKKELETAGKIATEAIENIRTVVSL
TQERKFESMYVAKLYGAYRNSVRKAHIYGITFSISQAFMYFSYAGCFRFGAYLIVNGHMR
FRDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAHLFRLFERQPLIDSHSEEGLRPDK
FEGNVTLNDVVFRYPTRPNVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPV
FGTVLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRIVTLEEIVWAAK
EANIHPFIETLPHKYETRVGDKGTQLSGGQKQRIAIARALIRQPRILLLDEATSALDTES
EKIVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVQEHGTHQQLLAQKGIYFSM
VSVQAGTPN
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggattcccggagacccgagggagcggagactgactttgaactgggcaacaacagcaac
caagataaagcaatgaagaaagtaaatttgattggaccattagcattgtttcgatactct
gattggcaggataaattatttatgtccttgggcactatcatggccatagctcatggagca
ggcctccccctcatgatgatagtatttggagaaatgactgacagatttattaatattgga
ggaaacttctcctttccagtgaatttgtcattgtcaatgctaaatccgggcagaattctg
gaagaagaaatgactagatatgcatattattattcaggattaggtgctggagttcttgtt
gctgcctatatacaagtttcattttggactttggcagctggccgacagattaagaaaatt
aggcaagagttttttcacgctattctacggcaggaaataggctggtttgatgtcagtgac
accactgaactcaatacacggctcacagatgacatctccaaaatcagtgaaggaattggt
gacaaggttggaatgttctttcaagcagtagccacgttttttgcaggattcatagtgggg
tttatcagaggatggaagctcactcttgtgataatggccatcagccctatcctgggactc
tctgcagctgtttgggcaaagataatctcggcatttagtgacaaagaactagccgcctat
gcaaaagccggtgctgtggcagaagaggctctgggagccatcagaactgtgattgcattt
gggggccagagcaaagagctggaaaggtatcagaaacatctagaaaatgccaaaaagatt
ggaattaaaaaagctatttcagcaaacatctccatgggcattgccttcctattaatatat
gcatcatatgctctggccttctggtatggatccactctagttatatcaaaagaatacact
attggaaatgcaatgacagtctttttctcaatcctaatcggagccttcagtgttggacag
gcagctccctgtattgatgcttttgccaatgcaagaggagcagcatatgtgatctttgat
attattgataataatcctaaaattgacagtttttcagagagaggacacaaaccagtcaac
atcaaagggaatttggagttcagtgatgttcatttctcttatccagctcgacctaatgtc
aagatcttgaagggtctcaacttgagggtagagagcggacagacggtggccctggttggg
aacagtggctgcgggaaaagcacgacggtccagttgatacagaggctctatgaccctgat
gggggtatggttaccatcgatgggcaggatattaggacatttaatgtaaggtatctgagg
gaaataattggagtggtgagtcaggagccagtgctgttttctaccacaattgctgaaaat
attcgttacggccgtggaaatgtcaccatggatgaaataaagaaggctgtcaaggaagcc
aatgcctatgagtttatcatgaaattaccacagaaatttgacaccctggttggagacaga
ggggcccagctgagtggtggacagaagcagagaatcgccatcgctcgggccctggttcgc
aaccccaagatcctcctgctggacgaggccacgtcagcactggacacagagagtgaagct
gaggtacaggcagctctggataaggccagggaaggccggaccaccattgtgatagcacat
cgtttgtctacaatccgaaatgcagatatcatcgctgggtttgatgatggagtcatcgtg
gagcaaggaagccacaaggaactaatgcagaagggaggggtgtacttcaggcttgttaac
atgcagacatcaggaagccagatcccatcagaagaatttaaagttgcactaactgttgaa
aagcctccgatgggtttggccccagatggccagaaaactcattacatacttaggaataaa
agcctaagaaattcacggaagtatcagagtggccttgatgtggagatcaatgaacttgag
gaaaacgtgccatcggtgtcttttatgaagatcctgaaactgaacaaaacagaatggccc
tactttgttgtgggaactctgtgtgccgtcgccaatggggcccttcagccagccttctct
atcatcttctcagagatgatcgcagtttttggaccaggggatgatgaagtgaagcagcag
aagtgcaacatgttctcattgcttttcttaggtctgggaattatttctttctttactttc
ttccttcagggcttcacatttgggaaggctggcgagatcctcaccacaaggcttcggtcc
atggcttttaaagcgatgctgagacaggacatgagctggttcgatgatcataacaacagt
actggtgcactttctacaagacttgcgacggatgcctcccaagtccaaggcgccacgggg
acaaggttggctttaattgcacagaatacagccaaccttggaactggtattatcatatcg
tttatctacggttggcagttaacccttttgctgttattggtcgttccaattattgctgta
tcaggaattgtggaaatgaaattgctggctggaaatgccaaaagagataaaaaagaactg
gaaactgctggaaagattgcaacagaggccatagaaaatattaggacagttgtgtccttg
acccaggagagaaaatttgaatcaatgtatgttgcaaaattgtatggcgcttacaggaat
tctgtgcggaaggcacacatctatgggattacttttagtatttcacaagcgtttatgtat
ttttcctatgccggttgttttcgatttggtgcctatctcattgtgaacggacacatgcgc
ttcagagatgttattctggtgttttcagcgattgtgtttggtgccgtggctctaggacac
gctagttcctttgctccagactatgctaaagccaagctgtctgcagcccacttattcaga
ctgtttgaaagacaacctttgattgacagccacagtgaggaaggcctgaggcctgataag
tttgaaggaaatgtgacccttaatgacgtcgtgttccgctatcccacccggcccaacgtg
cctgtgcttcaggggctgagcctggaggtgaagaagggccagaccctggccttggtgggc
agcagcggctgtgggaagagcacggtggtccagctcctggagcggttctacgacccagtg
tttggaacagtgctgctagatggccaggaagcaaagaaactcaatgtccagtggctgaga
gcccagctcggcatcgtgtcccaggagcccatcctgtttgactgcagcattgccgagaac
atcgcctacggggacaacagccgcattgtgaccctggaggagattgtgtgggcggccaag
gaggccaacatccaccccttcattgagaccttaccccataaatatgaaacaagagtggga
gataaggggactcagctttcaggaggtcaaaaacagaggattgctattgcccgcgccctc
atcaggcaaccccgaatcctactgctggatgaagctacatcggctctggacactgaaagt
gaaaagattgtccaagaagccctggacaaagccagagaaggccgcacctgcatcgtgatc
gctcaccgcctgtccaccatccagaacgcagacttgatcgtggtgattcagaacggcaaa
gtccaggagcatggcacacaccagcagctactggcacagaaaggcatctatttctccatg
gtcagcgtccaggctgggacaccgaactga
DBGET
integrated database retrieval system