Syngnathus scovelli (Gulf pipefish): 125990327
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Entry
125990327 CDS
T08785
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sscv01100
Metabolic pathways
Module
sscv_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125990327
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sscv01003
]
125990327
Enzymes [BR:
sscv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
125990327
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
125990327
Glycosyltransferases [BR:
sscv01003
]
Glycan extension
O-Glycan
125990327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
ADIP
MscS_porin
EXOC6_Sec15_N
TBK1_CCD1
TPR_MLP1_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
125990327
NCBI-ProteinID:
XP_049613334
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MQRNSGGLGGGGQPWVLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGSPDKRIFGP
RPGGELCEAKHVQDLCRIRESVSEELLQLEAKRQELNGEIARLNLRIEACKRSIDSAKQD
LLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKEDPGLPPPKSSRSCRLHTCFDYAR
CPLTSGFPVYVYDTDSYPWGEYIDPLVKQAFATSAKNNIYVTNDPGVACLYLVLVGELLE
SPSSLPPNPSDLEKQLKALPYWRSDGHNHVLVHLSRNSLTQNFLYNVSTGRAALVQSTYL
EQQYRDGFDLVASPLVHALSEPNFLHVPHQVPVKRKYLFTFQGERVESLRSSLREIPPQS
FEEEMDGDPPADYDDRIIGTLKAVQDSQLDQVLIEFTCKNPKPSLPSEWSLCGEREDRLE
VLKASTFALVIAPGDAQLVASAGCGMRLFEALEVGAIPVVLGDHSKLPYHQFIRWSEAAI
MVPKPRVTELHFLLRSLSDNDMLAMRRQGRFLWETYFSTSESILNTILANIRTRIQIPAA
PINEEPAQEIPHKAGKLAGTDANLADNGDLDLGPVETEPPYASPRYLRNFTYTAVDVYQT
WNRAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPIGGGVGGSGKEFQASLGGNVPREQF
TVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVHTEKN
SLNNRFLPWDVVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDLNHQ
SWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEFINCEDIAMNFLVSHI
TRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVL
FKTRLPHDKTKCFKFI
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcaacagcggcggactcgggggcggcggacagccgtgggtgctgaggcgggtg
cgtctcacctggctcagtttcatgcttttctttattctggtgttcttcccgctcattgcc
cactactacctcaccaccatcgatgaagccgggagtcccgataagcggatcttcgggccc
cggcccggcggcgaactgtgcgaggccaaacatgtgcaagatctgtgccgcatacgcgag
tcggtcagcgaggagctgctgcagctggaggccaagaggcaggagctcaacggggagatc
gccaggctcaacctgcgcatcgaggcttgcaagaggagcatcgacagcgccaagcaggac
ctgctgcaactgaagaatgttatcagtcaaacggagcattcctacaaagaactcatggcc
caaaaccagccaaaactgtccttgcctgtccgattacttcccgacaaggaagacccgggg
ttgccgccgcccaaatcgtcgcggtcctgccgcctgcacacctgcttcgactacgcccgc
tgccccctcacgtctggatttccagtttacgtttatgacacggactcctatccgtggggg
gaatatatcgaccccctcgttaagcaggcgtttgccacgtcggctaaaaataatatatat
gtaacgaatgaccccggcgtcgcttgtctctatttggtgttggtcggagagctgctggag
tcgccgagttctttaccgccaaatccgtctgatttggagaagcaactgaaagctcttccc
tactggcgatcggatggacacaatcatgtacttgtccatctttccagaaattccctcaca
cagaatttcctgtataacgtcagcacggggcgagcggcgctcgttcaatccacctacctg
gagcaacagtatcgcgacggctttgacttggtcgcctccccgctggttcacgcgctctcc
gaacccaacttcttgcacgtgcctcatcaggtacccgtgaaaaggaaatacctcttcacc
tttcaaggggagagggtggagtcgctgaggagcagcttgcgggagattcctcctcagtcc
ttcgaggaggagatggacggagatccgcctgccgactatgacgaccgcatcattggcact
ttgaaagccgtgcaggatagtcagttggatcaggtgctcatagagttcacctgtaaaaac
cccaagccaagtttaccaagcgaatggtctctatgcggagagcgagaagacaggctggag
gtactcaaggcgtcaactttcgccttggtgatcgccccgggagacgctcagctggttgcc
tcagcgggctgcggaatgagactttttgaagccctcgaagtcggcgccatccccgtagta
ctcggcgaccactccaaactgccctaccaccagtttatccgatggagcgaagcggccatc
atggtcccaaagccgcgtgtgacggaattacatttcctgctgcgcagcctctcggacaac
gacatgttagctatgaggcgacagggtcgcttcttatgggagacttacttttccacctcg
gagagcatacttaatactatccttgccaacattcgcaccaggattcagattcccgccgca
cctattaatgaagaacccgcacaagaaatcccccataaagcgggaaaactagcaggtacc
gatgctaacttggcagacaacggcgacctcgatttgggtcctgtcgagacggagccaccg
tacgcctcgccgcgctatctccgcaacttcacatacacggccgtggacgtttaccagacg
tggaaccgtgcgcccggcccttttcacttattcccccatactccgctggaccccgttctg
ccctccgaagccaaattcctgggttcgggaacaggtttcagacccatcggcggaggcgtg
ggagggtccgggaaggagttccaggcatctttaggcggcaatgttcccagggaacaattc
accgtggtcatgctgacgtatgagagggaggaagtgctgatgaactccttggagaggctg
aatggactgccttacctcaacaaggtcgtggtcgtttggaattcacccaagcctccttct
gatgaccttctgtggcctgacattgggcttcccattgtggtcgtccacaccgagaagaac
agcctaaacaaccgtttccttccctgggatgtcgtggagaccgaggccatcctttccatc
gacgacgacgcccacttgcgccacgatgagatcatgtttggtttcagagtttggcgagag
gccagagatcgcatcgtgggtttcccagggcgctatcacgcctgggatctcaaccatcag
tcctggctttacaactctaattactcctgtgagctctccatggtcctgacaggagcggcg
ttcttccacaagtattacgcctacttgtactcctacgtgatgccccaggccatcagggac
atggtggatgagttcattaactgtgaggacatcgcaatgaacttcctggtctcgcacatc
acccgcaaaccgccaatcaaggtgacatctcgctggaccttccgctgccccggttgcccc
caggccctgtcgcacgacgactcgcatttccacgagcgccacaagtgcatcaactttttc
gtcaaggtgtacggctacatgccgctgctgtacacgcagttccgcgtggattctgtgctt
ttcaaaacacgcctgccgcacgacaagaccaaatgcttcaagttcatctag
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