Solea senegalensis (Senegalese sole): 122776869
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Entry
122776869 CDS
T07721
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122776869 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122776869 (hdac6)
04131 Membrane trafficking [BR:
ssen04131
]
122776869 (hdac6)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122776869 (hdac6)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122776869 (hdac6)
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122776869 (hdac6)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122776869 (hdac6)
Membrane trafficking [BR:
ssen04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122776869 (hdac6)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122776869 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
122776869
NCBI-ProteinID:
XP_043893561
LinkDB
All DBs
Position
LG11:24153680..24165118
Genome browser
AA seq
1115 aa
AA seq
DB search
MQSGPDRPGSGLKSVRRSPRLSPESSAGLGKELRKGGSSLQEVKRKGRMERSREEELNNS
LKKLDLSCRSAVDGTGLVFSDIFTHHKNLWAQVHWCVFDVVVVVVVVDVDSHVESPDRVT
SIMKELQTQELLSLCVTVKPREATEEELLLVHTKQYVDVMRSTQTMSESELHTLSDKYDS
VYLHPESFQVCVLAVGSVLQLVDQVMTSELRNGFAVIRPPGHHAQTSEANGYCIFNNVAI
AARYAQNTHSVKRVLIVDWDVHHGQGIQYEFQDDPSVLYFSVHRYEQASFWPHLLESAGG
FVGSGQGEGRTMNVAWDKTQMKDADYITAFQQLLLPVAYEFQPQLVLVSAGFDAIVGDEK
GQMCVTPQCFHVLTHMLMSLAEGRLVLALEGGYNLQSTAEGAAACVSALLGGACPPLTPP
TAPSFSALKSISESVSALCPHWTCLQLLEGVPLADMAVIRATTNDERFQHSGAASSVATT
TGLVYDERMMEHLNMWDRHHPEQPQRIAHIYARHQALGLVHRCTRIPARLATKEELTMCH
SERLVQLISSSSLMKNRDLHRLSEEFNSIFINNQSFSCAQLAVGGCFAAVDAIMSGEVSN
GVAIVRPPGHHAETDSACGFCFFNTAALAARHAQKISHPAPLRVLILDWDVHHGNGTQHM
FEDDDSVLYISLHRYDNGTFFPSSEDAAPNQVGVGKGLGFNVNVAWSGGRMSDSDYLAAF
HHVVMPIATEFNPALVLVSAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAGGRVLLILE
GGYNLTSISDSMAMCTSVLLGDTPPALVMPLPPPHHSAVAVINEVIRHHAPYWRSLRINI
PASVRVSLPTPKHHGRRSSKGKSRKSEQSKEDKCPASPRGRGDMEEVDTLDQLAQGLASL
DISLSSANHSPATSTPVGGARAKVHQIQEEIICEGEQKAESSEGKCDQSQSESQTQMVAA
TPDSVTFGDEATGGMGAELEVEGACGWSKPQMSLELACGGQSPLYVVDPLPWCPHLDAVK
PLPPSGINILLPCQDCDSVAENWICLTCYQVFCGRYVNEHMLTHGCVSEHPVVLSFSDLS
AWCYQCESYVHHQILFEAKNSAHLAKFGEEVPPWS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggaccagatcgtccaggatctggactgaagtctgtcaggagatctccgcgt
ctgtctcctgagagcagcgctggtctaggaaaggagttgaggaaaggaggcagcagcctg
caggaggtgaagaggaaaggaaggatggagaggagccgagaggaggagctgaacaacagt
ctgaagaaactggacctgtcctgcagatcagctgttgatgggacaggccttgtcttctct
gacatcttcactcatcacaagaacctatgggcccaggtacactggtgtgtgtttgatgtc
gttgttgttgttgttgttgttgatgttgacagtcatgtggagagtccagacagagtgacg
tccatcatgaaggagctgcagactcaggagcttctgtctctctgtgtcacagtgaagccc
agagaagcaacagaagaagagctgctcctcgtccacacgaaacagtatgtggacgtgatg
aggtcgactcagacgatgtcagagagtgaactacacacactgtctgacaaatatgactct
gtgtatctgcatcctgagtccttccaggtgtgtgtgttggctgtaggttcagtcctccag
ctggtcgatcaggtgatgacctctgaactcagaaatggatttgctgtcatcagacctcca
ggtcaccacgctcagaccagcgaggcaaacggctactgcatcttcaacaacgtggcgatt
gctgcgcgatatgctcagaacacacactctgttaaaagagtgttgatagtggactgggac
gtccatcatggtcaggggatccagtacgagttccaggacgaccccagtgtcctgtacttc
agtgtccacaggtacgagcaggcgtccttctggcctcacctgctggagtctgctggtggg
tttgtgggcagtggacaaggcgaggggcggaccatgaacgtggcctgggacaagacgcag
atgaaagatgctgattacatcactgcttttcaacaactgcttttgcctgtagcctacgag
tttcagcctcagctggttctggtctctgctggatttgatgctattgttggagacgagaag
gggcagatgtgtgtgactcctcagtgtttccatgttctcactcacatgttgatgagtttg
gctgaaggccgacttgttctcgctctcgagggaggttataacctgcagtccacagcagag
ggcgctgcagcctgtgtcagtgctctgctgggaggagcctgtcctcctctgactccgccc
acggctccatctttcagtgcactgaagtccatcagtgagagtgtctctgctctgtgtcca
cactggacatgtctgcagctgctagaaggcgtcccattggctgatatggccgtcatcaga
gcaacaaccaatgacgagcgctttcagcacagtggggccgcctcctctgttgccacgacg
acaggactggtttacgacgagcgtatgatggagcacctgaacatgtgggacagacatcat
ccagagcagccgcagagaatcgcccacatctacgccagacaccaggcgctcggactggtc
caccgctgcacacgtatcccagcacgcctcgcgacgaaggaggagctcaccatgtgtcac
agtgagcgtctggtccagctgatcagctcctcttcactgatgaagaacagagatcttcac
agactcagtgaagagtttaactctatcttcatcaacaaccagagcttcagttgtgctcag
ctcgctgtcggaggctgctttgccgccgtggatgccatcatgagcggagaggtgagtaac
ggcgtggcgattgtccggccccccggtcatcacgcagagacagactccgcctgtggattc
tgcttcttcaacacagcagccctcgctgctcgccacgcccagaaaatctcccatcctgca
cctctccgagtcctcatcctcgactgggacgttcaccacggcaacgggacacagcacatg
tttgaggacgatgacagtgtcctgtacatctccctccatcgctatgacaacgggacgttc
ttcccgtcctctgaagacgccgcccccaaccaggtgggtgtgggaaaaggtttgggcttc
aacgtgaatgtggcgtggagcggaggacggatgagcgactctgattacctcgctgctttt
catcatgtggtcatgccgattgccaccgagtttaaccccgcccttgttctggtgtcagcc
ggctttgatgcggctcgtggtgatcctctgggtggatatcatgtgacccctgagggatac
gcccacctcacacacctcctgatgtcattggctgggggacgtgtcctgctcatcctggag
ggaggttacaacttgacctccatctctgactccatggcgatgtgtaccagcgtgttgcta
ggagacacgcccccagccctggttatgcccctcccccctcctcatcacagcgccgtggca
gtgatcaacgaagtcatccgacaccacgccccctactggaggtcactgaggatcaacatc
ccagcatctgtgcgggtgtctctgcccaccccaaagcatcatgggagacgtagttctaaa
ggaaaaagcaggaaatctgagcagagtaaagaagacaagtgtccagcatccccacgagga
cgaggggacatggaggaagtggacacgctggaccaactagctcagggattggcgagtttg
gacatcagtctgtcctcagccaatcacagtcctgctacgtccactccagtaggtggggcc
agagcgaaggtccaccagatacaggaggagatcatctgtgaaggtgaacagaaggcggag
tctagtgagggcaaatgtgatcagagccaatcagagagtcagacgcagatggtcgctgcg
acaccagactcagtcacctttggagacgaggctactggtggaatgggggcggagctagag
gtagagggagcatgcggttggtcaaaacctcagatgtctctggagttggcttgtggagga
cagtctcctctgtacgtggtcgaccccctcccctggtgtcctcacctggatgcagttaag
cccctcccaccctcaggtataaacatcctcctgccgtgtcaggactgtgactctgtggct
gagaactggatctgtctcacctgctaccaggtgttctgtggccgctacgttaatgagcac
atgctaactcatggttgtgtgagtgaacaccctgtggtgctgagcttctctgacctgtct
gcgtggtgttaccagtgtgagtcgtacgtccaccaccagattctgtttgaagctaaaaac
tctgctcacctcgcaaagtttggagaggaggttcctccgtggagctga
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