Saccharothrix syringae: EKG83_05360
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Entry
EKG83_05360 CDS
T06258
Symbol
vanX
Name
(GenBank) D-Ala-D-Ala dipeptidase VanX
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
ssyi
Saccharothrix syringae
Pathway
ssyi01502
Vancomycin resistance
ssyi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssyi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EKG83_05360 (vanX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EKG83_05360 (vanX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssyi01002
]
EKG83_05360 (vanX)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssyi01011
]
EKG83_05360 (vanX)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ssyi01504
]
EKG83_05360 (vanX)
Enzymes [BR:
ssyi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
EKG83_05360 (vanX)
Peptidases and inhibitors [BR:
ssyi01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
EKG83_05360 (vanX)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssyi01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
EKG83_05360 (vanX)
Antimicrobial resistance genes [BR:
ssyi01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
EKG83_05360 (vanX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
QFZ16969
UniProt:
A0A5Q0GSL1
LinkDB
All DBs
Position
1139174..1139794
Genome browser
AA seq
206 aa
AA seq
DB search
MRGDFVFVDEFVPGVRWDAKYATWDNFTGKPVDGYLVNRIVGTTALCAALEEARGKAESL
GFGLLLWDGYRPRRAVDCFLRWSARPEDGRTKRRHYPNIGRAEVVELGYVAARSGHSRGS
TVDLTLYDLATGELTPMGGGHDLMDPISHHGAEGITAVEARNRRHLCSIMEDCGFERYDR
EWWHYTLKGEPHPDSYFDFPITWSGP
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgaggggcgacttcgtcttcgtggacgagttcgtgcccggggttcgctgggacgccaag
tacgccacctgggacaacttcaccggcaaaccggtggacggctacctggtcaaccggatc
gtgggcacgacggccctgtgcgccgccctggaggaggcccgggggaaggccgaatcgctc
ggcttcggcctgctcctctgggacggttaccgcccccggcgcgccgtggactgcttcctg
cgctggtcggcgcggccggaggacgggcggaccaagcggcgccactacccgaacatcggc
cgggccgaggtggtcgaactgggatacgtggcggcccggtcggggcacagccggggcagt
accgtcgacctgacgctctacgacctggccaccggggagttgacccccatgggtggcggc
cacgacctgatggatccgatctcgcaccacggggcggaggggatcacggcggttgaagcg
cgcaaccgccgacacctctgctcgatcatggaggactgcggtttcgagcggtacgaccgc
gagtggtggcactacacgctgaagggtgaaccgcacccggactcgtacttcgacttcccg
atcacgtggtcgggtccgtga
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integrated database retrieval system
