Tigriopus californicus (tidepool copepod): 131886011
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Entry
131886011 CDS
T09700
Name
(RefSeq) exostosin-3-like
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tcf01100
Metabolic pathways
Module
tcf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
131886011
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcf01003
]
131886011
Enzymes [BR:
tcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
131886011
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
131886011
Glycosyltransferases [BR:
tcf01003
]
Glycan extension
O-Glycan
131886011
BRITE hierarchy
Motif
Pfam:
Glyco_transf_64
Exostosin
CENP-F_N
HAUS-augmin3
ATG16
APG6_N
Filament
THOC7
CCDC22_CC
Cluap1
DUF4763
EzrA
DUF3450
DUF4407
ADIP
Suppressor_APC
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
131886011
NCBI-ProteinID:
XP_059090196
LinkDB
All DBs
Position
9:complement(10051652..10054718)
Genome browser
AA seq
889 aa
AA seq
DB search
MWRSVRCSRLLLGLALLLFLLIPLVVHYFWLQDLSRNSEHNSAHALASGGATHLDGVHLD
NALDQLAAAELVRKTLGLSGDPSGPVDGPASEKRIQDLMRIKHSVQNELQTLESQRTEMQ
RQIASFHRKIEELRTEATRHQTDLERLRLSIQQAQVALNEFQTRNTPEIRAPRPLALDYS
QRVALVGLPSNQMEGQCTMGHCFDYSACPLSSPMSVYVYEVHRHRNILPPDLVLTDQGRQ
ACLFLVWVDRVDGSSLERLEFWAGDGRNHIVMVTGQDPIPAHSYRALIGSTSFSRRSFRS
GFDLVVPNHLSIPDLVDEPWRDTPPLLPLHRRFLVSYQDHQDLVQLTESERALFESLRQI
GLDQTDDQVSLELNCPISEEDGLCHTDDKRAHTLESSTFTLIPILGPPMLSSAQVQRRLF
EALKHNSIPVIIGHPWASLAIPFSEQISTSDFIVTLPLARAGELHYLLRSFPDSDLFHMK
RKGSLFWKTYMSSKVKVIRTVVNIVRERLHIPPPPFSDVASPSVFDQDHPRSIMESLPVE
MEPSEPLGPLEPPKASVPFRRNLSTIVVDGYARWNERFDPFQLPPSTPWEPVLPTDAKFM
GSSVGFRPIGEGVGGAGKEFSQALGGNKPAEQFTVVMLTYERELVLIDALVRLYGLPFLN
KVVVVWNSPQAPSGDLQWPDIGVPIEVVRTAVNSLNNRFLPFDVIETEAILSVDDDAHLR
HDEIIFGFRVWRENRDQLVGFPGRYHAWDLEHNSWNYNSNYSCELSMVLTGAAFYHKYYN
YLYSSVMPKAIRTKVDEFMNCEDLAMNFLISHVTRKPPVKVTSRWTFRCPGCPVSLSEDD
THFQERHKCINFFMEVYGYMPLLFTQFRADSVLFKTRISADKQKCFKFI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgctcagtgcggtgctcccgattactcctgggattggccctcctactgttcctg
ctcatcccgctcgtggtccattacttttggctccaggatctgtcccgaaatagcgagcac
aattcagcccatgcattagccagtggtggcgccactcatctggatggcgtccatctcgat
aacgccttggaccaactagccgcggctgagctggtccgtaagaccttgggcttgtccggg
gatcccagtggtccggtggatggacccgcctcggagaaacgaattcaggacctcatgcgc
atcaagcactccgttcaaaatgagttgcagacgctcgaaagccaacggaccgagatgcaa
cgtcagatcgcttcgtttcatcgcaagattgaggagctccggaccgaggccacccgccat
caaacggatttggaacgcctacgtttgtccattcaacaggcgcaagtagccttgaacgag
ttccaaacgcgaaacacacccgagatacgagcccctcggccgttggctttggattactcc
caacgagtcgccctggtggggctcccctccaatcaaatggagggccaatgcaccatggga
cattgtttcgattattcggcctgccctctgagctcacctatgtcggtctatgtatatgag
gtccaccgacatcggaacatcttacccccggacctggttttgacggaccaagggcgacag
gcttgtttgtttttagtttgggtggatcgagtagatggttcttcgttggagcggctcgaa
ttttgggccggggatggacgcaatcatatagtaatggtcacgggtcaagatccaatcccc
gcacattcttatcgcgcactcattggctcgacctcgttttctcggcggtcttttcgttcg
ggttttgatttagtggtgcccaatcatctctctattccggacttggttgacgagccttgg
cgggatactccccccttactgccacttcatagacgctttctggtgtcgtatcaggatcat
caggatctagttcaattaacagagtcagaacgtgcgctttttgagagtttgcgacaaatc
ggtttggatcaaacggatgatcaagtgtcactggaattgaactgccccatctctgaagag
gatgggctgtgtcatacggatgataagcgagctcacactcttgaatcttcgacgttcact
ttaatcccaatcttgggaccaccgatgctatccagtgcacaagtgcagcggcgactcttt
gaagctttaaagcataactcgatccctgtgataattggccatccgtgggcgtctttggcc
attcccttttcggaacaaatctccacttcggacttcatcgtcactttacctttagccaga
gctggagaactgcattatttgctgagatcgttcccagattctgacttgtttcatatgaag
cgaaaaggtagtttgttttggaaaacgtacatgtcttcgaaagtgaaagtgattcgcacg
gtggtcaatattgtcagagaacgacttcatatcccgccacctccattttcggatgtggcg
tcacccagtgtttttgatcaagaccatcctcgatcgattatggaaagtctccccgtcgaa
atggagcctagtgagcctctcggccccttggagccccctaaagcctccgtaccctttaga
cggaacctctcgaccatagttgttgatggatatgctcgatggaatgaacgtttcgatccc
tttcagttacctccaagcactccttgggaacccgttttacctacagatgccaagttcatg
ggatcatccgtgggatttcgtcccataggtgaaggcgtgggtggagctgggaaggagttc
agtcaagctcttggtggcaacaaaccagcggaacaattcacggtggtcatgctcacgtac
gagcgtgaacttgttctcatcgatgccttggtccgattgtatggcttgccattcttgaat
aaagtggtagtggtttggaattctccacaagcacccagtggtgacttgcaatggccggat
atcggtgtacctattgaggtagttcggacggcagtcaacagtttgaacaaccggttcttg
ccctttgacgtgattgaaaccgaagccattctttctgtggacgatgacgcccatttacgt
cacgacgagatcatttttggattccgggtttggcgggaaaaccgggatcagttggtgggt
ttccctggacgatatcacgcgtgggacttggagcacaactcttggaattataattccaat
tactcatgcgagctctccatggtgttgacgggtgctgccttttatcataagtattacaac
tacctatattcttctgtcatgcctaaagcaattcgtacaaaagtggacgagttcatgaat
tgtgaagatctggccatgaacttccttatctcacatgtcactcgaaaacctccggtcaaa
gtgacctctcgttggacgtttcgatgtccgggttgcccagtttcgctctccgaagacgat
actcatttccaagaacgacacaaatgtatcaatttcttcatggaggtatatggttacatg
cctcttttgttcactcaatttcgagccgactcggtgctattcaagactcgaatttctgcc
gacaagcagaagtgctttaaatttatctaa
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