Triticum dicoccoides (wild emmer wheat): 119299409
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Entry
119299409 CDS
T07278
Name
(RefSeq) histone deacetylase 15-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdc01009
]
119299409
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119299409
04131 Membrane trafficking [BR:
tdc04131
]
119299409
03036 Chromosome and associated proteins [BR:
tdc03036
]
119299409
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119299409
Protein phosphatases and associated proteins [BR:
tdc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119299409
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119299409
Membrane trafficking [BR:
tdc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119299409
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119299409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zinc_ribbon_2
Motif
Other DBs
NCBI-GeneID:
119299409
NCBI-ProteinID:
XP_037432539
LinkDB
All DBs
Position
5A:73541430..73552038
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AA seq
614 aa
AA seq
DB search
MTSNMRPLNSKKGEVPSHGRENCGVSDQAFHGKCQSCDGVGKPSYPRANGVSLKESGTCN
FSCDHANALLVDGPKGSPARPGHIDSAVCAQHGCLHAKNESCMPCNDLQQESDREQAGDT
LDDLFFFNDEEDDDIDWEPSARLAENRWFCLNCTMPNLDEVKHCLNCHELKGSEVAAGYD
VFKTHIARAALVSADTASVLVSTAIGFDERMLLHSEMEIKPNPHPERPNRLRAIAASLAA
AGIFPSKCALVPPREITKEELVMVHTSDHVESVEQTKNMLYSYFTSDTYANGHSACAAKL
AAGLCADLASLIVSGRVRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAGAKKV
LIVDWDVHHGNGTQEIFEGNKSVLYISLHRHEDGSFYPGTGAADEVGVLDGKGFSVNIPW
SCGGVGDNDYIFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSM
LTACSEGKLLVILEGGYNLRSISSSATEVVKVLLGDGPSYGTDAAAPSKEGMQTVLQVLD
IQQKYWPVLVPIFASLQAQQGPTSSKYVNAENKLKRRMLTGGPGPVWWKWGSKRLLYEVL
FEGRRPRKSSAKGK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaacatgagaccgcttaacagcaaaaagggtgaggtcccttcccatggtcgt
gagaactgtggagtttctgaccaagcttttcatggcaaatgtcaaagctgcgatggtgtt
ggaaaaccatcttatcctagagcgaatggcgtttccctgaaagaaagtggaacatgcaat
tttagttgtgatcatgctaatgctttattagtagatgggcccaaaggttcaccagcaagg
ccaggacatattgacagcgcagtttgtgctcagcatggttgtctgcatgccaagaatgaa
agttgcatgccttgcaatgatctgcagcaagagtctgatagagaacaagctggagatacc
ctggatgatctgtttttctttaacgatgaagaggatgatgatattgactgggaaccttct
gctcgcctggctgaaaacagatggttttgcttgaactgtacaatgccaaacttggatgag
gttaaacattgcctgaattgccatgagcttaagggatctgaagtagctgctggatatgat
gttttcaaaactcacattgcgcgggcagctttggtatctgctgacacagcatcggtactg
gtatctacagcgattggttttgatgaaagaatgttgctccacagtgagatggaaattaaa
ccaaatccacatccagaaagacccaaccgtcttcgtgcaattgctgccagtctggctgct
gcaggaatatttccctcaaagtgtgccttggtacctcctcgagaaatcactaaggaggaa
ctcgtaatggtccatacttcagatcacgtcgaaagcgtagagcagacaaagaacatgctt
tacagttacttcacttcggatacttacgcgaatggacactcggcatgtgctgccaaactt
gcagcaggcctatgcgctgatcttgctagtttgatagtgtctggccgtgtccggaatggc
tttgcgctggtgagacctcctgggcatcatgctggggtaaagcaagccatgggcttttgt
cttcacaacaatgcagcagtggctgcattagctgcacaaaaagcaggcgctaagaaagtc
ttgatagttgactgggatgtgcaccatggcaatggcacacaggagatatttgaagggaac
aaatcagttttatacatatcattacaccgccatgaggatggaagcttctaccctggaact
ggagcagcagacgaggtgggagttttggatggtaaaggattctcggtaaatataccttgg
agctgtggtggtgttggagacaatgactacatctttgcttttcagcacgtggtgcttcca
atagctacagaatttgccccagacatcaccattatatctgcaggatttgatgcagcaagg
ggtgatcctctgggttgttgtgatgtcactcctgccggatactctcagatgacgtccatg
ttaactgcttgctcagaaggaaagttgttggttatacttgagggaggatacaatcttcgg
tctatatcctcgtctgcaactgaagttgtcaaggtcctactcggggacggtccaagttat
ggcacagatgcagcagcaccatcaaaggagggcatgcagactgtcttacaagttctggac
atccagcaaaaatattggccagttttagttccaatctttgcatcacttcaagcgcagcag
gggccgacttcttccaaatatgttaacgctgaaaacaagctgaagagaaggatgctcacc
ggaggaccagggcccgtgtggtggaaatggggaagcaagaggcttttgtacgaagtactg
tttgagggccgccgtccaagaaagagcagtgcgaaaggaaaatga
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