Triticum dicoccoides (wild emmer wheat): 119307570
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Entry
119307570 CDS
T07278
Name
(RefSeq) histone deacetylase 15-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdc01009
]
119307570
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119307570
04131 Membrane trafficking [BR:
tdc04131
]
119307570
03036 Chromosome and associated proteins [BR:
tdc03036
]
119307570
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119307570
Protein phosphatases and associated proteins [BR:
tdc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119307570
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119307570
Membrane trafficking [BR:
tdc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119307570
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119307570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zinc_ribbon_2
Motif
Other DBs
NCBI-GeneID:
119307570
NCBI-ProteinID:
XP_037439543
LinkDB
All DBs
Position
5B:94935203..94945597
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AA seq
614 aa
AA seq
DB search
MTSNMRPLNSKKGEVPSDGRENCGVSDQAFHGKCQSCDGVGKPSYPRANGVSLKESGTCS
FSCDHANALLVDGPKGSPARPGHIDSADCGQHGCLHAKNESCMPCNDLQQESDREQAGDT
LDDLFFFNDEEDDDIDWEPSARLAENRWFCLNCTMPNLDEVKHCLNCHELKGSEVAAGYD
VFKTHIARAALVSANTASVLVSTAIGFDERMLLHSEMEIKPNPHPERPNRLRAIAASLAA
AGIFPSKCALVPPREITKEELVMVHTSDHVESVEQTKNMLYSYFTSDTYANGHSACAAKL
AAGLCADLASLIVSEHVQNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAGAKKV
LIVDWDVHHGNGTQEIFEGNKSVLYISLHRHEDGSFYPGTGAADEVGVLDGKGFSVNIPW
SCGGVGDNDYIFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSM
LTACSEGKLLVILEGGYNLRSISSSATEVVKVLLGDGPSYGTDAAAPSKEGMQTVLQVLD
IQQKYWPVLVPIFASLQAQQGPTSSKYVNAENKLKRRMLTGGPGPVWWKWGSKRLLYQVL
FEGRRPRKSRAKGE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaatatgagaccgcttaacagcaaaaagggtgaggtcccttccgatggtcgt
gagaactgtggagtttctgaccaagcttttcatggcaaatgtcaaagctgcgacggtgtt
ggaaaaccatcttatcctagagcgaatggcgtttccctgaaagaaagtggaacatgcagt
tttagttgtgatcatgctaatgctttattagtagatgggcccaaaggttcgccagcaagg
ccaggacatattgacagcgcagattgtggtcagcatggttgtctgcatgccaagaatgaa
agttgcatgccttgcaatgatctgcagcaagagtctgatagagaacaagctggagatacc
ctggatgatctgtttttctttaatgatgaagaggatgatgatattgactgggaaccttct
gctcgcctggctgaaaacagatggttttgcttgaactgtacaatgccaaacttggatgag
gttaaacattgtctgaattgccatgagcttaagggatctgaggtagctgctggatatgat
gttttcaaaactcacattgcgcgggcagctttggtatctgctaacacagcatcggtactg
gtatctacagcgattggttttgatgaaagaatgttgctccacagtgagatggaaattaaa
ccaaatccacatccagaaagacccaaccgtcttcgtgcaattgctgccagtctggctgct
gcaggaatatttccctcaaagtgcgccttggtacctcctcgagaaatcactaaggaggaa
ctcgtaatggtccatacttcagatcacgtcgaaagtgtagagcagacaaagaacatgctt
tacagttacttcacttcggatacttacgcgaatggacactcggcatgtgctgccaaactt
gcagcaggcctatgcgctgatcttgctagtttgatagtgtctgagcatgtccagaacggc
tttgcgctggtgagacctcctgggcatcatgctggggtaaagcaagccatgggattttgt
cttcacaacaatgcagcagtggctgcattagctgcacaaaaagcaggcgctaagaaagtc
ttgatagttgactgggatgtgcaccatggcaatggcacacaggagatatttgaagggaac
aaatcagttttgtacatatcattacatcgccatgaggatggaagcttctaccctggaact
ggagcagcagacgaggtgggagttctggatggtaaaggattctcggtaaatataccttgg
agctgtggtggcgttggagacaatgactacatctttgcttttcagcatgtggtgcttcca
atagctacagaatttgccccagacatcaccattatatctgcaggttttgatgcagcaagg
ggtgatcctttgggttgttgtgatgtcactcctgccggatactctcagatgacgtccatg
ttaactgcttgctcagaaggaaaattgttggttatacttgagggaggatacaatcttcgg
tctatatcctcatctgcaactgaagttgtcaaggtcctactcggggacggtccaagttat
ggcacagatgcagcagcaccatcaaaggagggcatgcagactgtcttacaagttctggac
attcagcaaaaatattggccagttttagttccaatctttgcatcacttcaggcgcagcag
gggccgacttcttccaaatatgttaacgctgaaaacaagctgaagagaaggatgcttacg
ggaggaccagggcctgtgtggtggaaatggggaagcaagaggcttttgtaccaagtactg
tttgagggccgtcgtcctagaaagagcagggcgaaaggagaatga
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