Triplophysa dalaica: 130407274
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Entry
130407274 CDS
T09616
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdw01009
]
130407274 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130407274 (hdac6)
04131 Membrane trafficking [BR:
tdw04131
]
130407274 (hdac6)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130407274 (hdac6)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130407274 (hdac6)
Protein phosphatases and associated proteins [BR:
tdw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130407274 (hdac6)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130407274 (hdac6)
Membrane trafficking [BR:
tdw04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
130407274 (hdac6)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130407274 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
130407274
NCBI-ProteinID:
XP_056586020
EnsemblRapid:
ENSTDLG00000020378
LinkDB
All DBs
Position
18:complement(2487374..2497890)
Genome browser
AA seq
1095 aa
AA seq
DB search
MDSVPENVSGDSKGSSGSPKGTQEMRSTRENSKPSHRNSLQGARRKGRMDQSKAEEEMRS
QLQNLDVRGKTKATGTGLVYVDAFIRYHCLWDSSHPERPERVAVVMDTLDKECLLARCVR
VEAKAASEDDLLLVHTKGYIELMRSTQNMTEEELKTLADKYDSVYLHPELFTSACLAVGS
VLQMVDKVMMSQLRNGFCVVRPPGHHAHVDQMNGYCMFNNLAIAARYAQKQHGVERVLIV
DWDVHHGQGVQYIFEEDPSVLYFSVHRYEDGSFWPHLKESSSSSVGSGAGQGYNINIPWN
KTGMEDGDYVAVFQQVLLPVAYEFQPQLVLVAGGFDSVIGDPKGEMRASPQCFSILTHML
KGIAQGRLVMALEGGYNLESTAEGVCASVRSLLGDPCPHLTSPGAPSESALKSISQTTSA
LYPFWKSLQTLEGGPLSDVTPLPAPVCTEVKISSSVTGLVYDQMMMLHHNIWDSHHPELP
QRISRIFARHEESGLLSRCHRIPTRLASEEELALCHSSEHISTMKNTERMKPRDLHRLGN
DYNSIFISNESYKCALMAAGACFNSVQAILTGQVRNGVAIVRPPGHHAEEDKACGFCFFN
TAALTARYAQSITNQSLRVLILDWDVHHGNGTQHIFDEDDSVLYISLHRYEDATFFPSSE
DANYDQVGRGKGKGYNVNIPWNAGKMGDAEYLAAFHHVVMPIAREFAPELVLVSAGFDAA
RGDPLGGYQVTPEGYAHFTHMLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPP
ALSSLNPPHPSAAVTINNVLRAHAPYWRSLRIQLPESLRLSLPSPEPKSKRTSVGKSKKS
PRQSTPSQTLRQGPQHHVSPEASAPPTAAHEHSGLDDLAQGMLALDLNTSASSNPSPTSV
PIGGARRKVKPSAGQMSDSPLKLVSENSKDENGTTAMTTVGSTLKSETTGESGGAGDHKG
ACGYTEKSVFELVCGAQDEDGETMFVVDPLSWCPHLESVRPVPAGGVDVFLPCEDCGGDA
ENWTCLFCYKVLCGRYVNQHMVTHGQLSGHPLVLSFADLSVWCYACESYVHNKALHEVKN
SAHLMKFGEEMAPFN
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtgcctgaaaatgtctccggagactccaaaggttcctctggatctccaaaa
gggacacaggagatgcggagcaccagagagaacagcaagccgagccataggaatagcctg
cagggggcaaggaggaagggaagaatggatcagagtaaagcagaggaggagatgaggagt
cagctccaaaacctggatgtccgggggaagactaaagcaacaggaaccggtctcgtctac
gtggacgcgttcattcgctatcactgcctctgggacagcagtcatccagagcgcccagag
agagtggctgttgttatggacacgctggataaagagtgtttgctggcacgctgcgtacgg
gtcgaggccaaagctgcatcagaggacgatctcttactcgttcatacgaaagggtacatc
gagctgatgagatccacacagaatatgaccgaagaagaactgaagacgcttgccgataaa
tatgactcggtctatctccatcctgaacttttcacttcggcttgtctggcggtgggatcg
gttctccaaatggtggataaggtgatgatgtcacaactgcgtaacgggttctgtgtcgtc
aggcctcctggtcaccacgctcacgtagatcagatgaacggctactgtatgttcaataac
ctggctatagcggcacgatacgctcagaaacagcacggagtggaacgagttctgattgtg
gattgggacgtgcatcacggccagggagtccagtatatttttgaagaggatcccagtgtg
ctgtatttctcagtgcacagatatgaagacggctcgttctggcctcacctcaaagagtct
tcgagcagttcagtaggttcaggagcgggtcagggctacaacatcaacataccctggaac
aagacaggaatggaagatggagattacgtggcagttttccagcaggtcctcctgccggtg
gcgtacgagtttcagccacagctggtgttagtggcgggaggctttgactcggtgatcgga
gacccgaagggtgagatgcgagcgagtccacagtgtttctctattctgactcacatgctg
aaaggtattgcacaggggcgactcgtgatggcccttgagggtggatataacctggagtcc
accgctgagggcgtttgtgcatctgtgaggtcacttctgggcgacccctgccctcatctg
acctctcctggtgctccgagtgaaagtgcactaaagtccatctcacagaccacctcagcc
ctgtatccattttggaagagtcttcagacacttgagggcggtcctctgtcggatgtcaca
cccctgcccgctccggtatgtacagaggtaaagatctcttcctccgtcaccgggctggtt
tatgaccaaatgatgatgctgcatcacaacatttgggatagtcatcacccagaactccct
cagagaatttcacgaatctttgcccgtcacgaggagtcgggcctgctgtctcgctgccat
cggatacccactcgcttagcatcggaagaagagctggcactatgccacagttcggagcac
atcagcacgatgaagaacacagagcgcatgaaacccagagatcttcatcgactggggaac
gattacaattctattttcatcagtaatgagagctataaatgtgccctgatggctgccgga
gcgtgtttcaactccgtacaggccattcttacaggccaggtgagaaatggtgtggctata
gtccgtcctccaggtcaccatgcagaggaagacaaagcctgtgggttctgtttctttaac
accgctgcgctgacggcacgctacgcccagagcatcaccaaccaatcgctgcgcgtcctc
atccttgactgggatgttcatcacggaaacggcacacagcacatctttgatgaggatgac
agcgttctgtacatctctttgcatcgctacgaagatgcaacgttcttccccagctctgag
gatgctaactatgatcaggtgggacgagggaaaggaaaaggttacaatgtcaacatcccc
tggaacgcagggaagatgggagacgctgaatacctggcggctttccatcatgtagtgatg
cccatcgccagagagtttgctccggagctggtgctggtatctgctgggtttgatgcggca
cggggcgatccgttaggagggtatcaggtcacacctgagggttacgcccatttcacccac
atgttaatgagcctagcagccggcagagtgctggtcatactagagggaggatataacctc
acctccatctctgaatccatgtccatgtgcaccagtatgttactgggagattcccctccc
gctctgtccagcctaaaccctcctcaccccagtgctgctgtcaccatcaacaatgtcctc
cgcgctcatgccccctactggagatccctgagaatacagctaccagagtctctccgcttg
tctttaccatctccagaacccaaaagcaagcggacatcagtgggcaaaagcaagaaatct
cctcgccagtccaccccctcccaaactctcagacagggaccgcagcatcacgtctccccc
gaagcctcggctccgcccactgctgcacacgagcattccggcctcgatgacctcgctcag
ggcatgctcgctctggatttaaacacgagtgcctcgtctaaccccagcccaacgtcagtt
cccattggaggagctagacgtaaggtgaaaccttcagccggacagatgtcagattcacct
ctgaaattggtgtcagagaacagcaaagacgaaaatgggaccacggccatgacaacagtg
ggatctacgctgaagtctgagaccacaggagaatcaggtggtgccggtgaccataaaggg
gcctgtgggtacactgagaaatccgtgtttgagctggtgtgtggagcccaagatgaagat
ggggagacgatgttcgtggtggacccgttgtcatggtgcccacacttggagtccgtgcgg
ccggtgcccgcaggtggcgttgacgtcttccttccatgtgaagattgtggaggggatgct
gaaaactggacctgtctcttttgctacaaggtgctctgcgggcgttatgtaaaccagcac
atggtgacccacgggcagctgtcgggtcatcctctggtactgagtttcgctgatctttcg
gtttggtgctatgcctgcgagtcatacgtacacaacaaggcgctccatgaagtcaaaaac
tctgctcatttaatgaagtttggagaggagatggctcctttcaactaa
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