Theropithecus gelada (gelada): 112616386
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Entry
112616386 CDS
T08041
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge04613
Neutrophil extracellular trap formation
tge05014
Amyotrophic lateral sclerosis
tge05034
Alcoholism
tge05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
112616386 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
112616386 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112616386 (HDAC6)
09165 Substance dependence
05034 Alcoholism
112616386 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tge01009
]
112616386 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tge03019
]
112616386 (HDAC6)
04131 Membrane trafficking [BR:
tge04131
]
112616386 (HDAC6)
03036 Chromosome and associated proteins [BR:
tge03036
]
112616386 (HDAC6)
Enzymes [BR:
tge01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112616386 (HDAC6)
Protein phosphatases and associated proteins [BR:
tge01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112616386 (HDAC6)
Messenger RNA biogenesis [BR:
tge03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112616386 (HDAC6)
Membrane trafficking [BR:
tge04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112616386 (HDAC6)
Chromosome and associated proteins [BR:
tge03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
112616386 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112616386
NCBI-ProteinID:
XP_025229128
Ensembl:
ENSTGEG00000003809
LinkDB
All DBs
Position
X:complement(10269646..10282216)
Genome browser
AA seq
1322 aa
AA seq
DB search
MASRTTATVAEARQSLRLSPVGNCRRLRFTQAQHSWRSTPTHRPDACELARGVAQHSWRS
TLARSRAACELARGRQKLGGASQGRSLRKGLRPVSGANRGRGQASSTMTSTGQDSTTTRQ
RRSRQNPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIAGLQG
MDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQA
RFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLR
LVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWD
VHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVG
MRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGL
AGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEP
FWEVLVRSTETVEGDNMEEDNVEENEEEGPWEPPVLPILTWPVLQSRTGLVYDQSMMNHC
NLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEK
MKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAE
QDAACGFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHR
YDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPE
LVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAA
CTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVEDREGPSSSKLVTK
KAPQPAKPRLAERMTTREKKVLEAGMGKITSASFGEESTPGQTKSERAVVALTQDQSSEA
ATGGATLAQTISEAAVGGAILGQTTSEEAVGGATPDQTTSEKTVGGATLDQTTSEDAVGG
ATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQTPLASSTDHQTPP
TSPVQGTTPQISPSTLIESLRTLELGSKSQGASESQAPGEENLLGEAAGGQDMADSMLMQ
GSRGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYC
GRYINGHMLQHHGNSGHPLVLSYIDLSTWCYYCQAYVHHQALLDVKNIAHQNKFGEDMPH
PH
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaggacgacagcgacggtagccgaggcacggcaaagcttgcgcctcagcccc
gttgggaactgccggcgcctgcgttttacgcaagcgcagcacagctggcgtagcacgccg
acgcaccgccccgacgcctgtgagctcgcgagaggtgtggctcagcacagctggcgtagc
acgctggcgcgctcccgcgccgcctgtgagctcgcgagaggtcgccagaaacttggcgga
gcgagccaagggcggagtttgagaaaggggctgcgtccagtgagtggagcgaaccgcggc
aggggtcaagcctcctcaactatgacctcaaccggccaggattctaccacaaccaggcag
cgaagaagtaggcagaacccccaatctccccctcaggactccagtgtcacttcgaagcga
aacattaaaaagggagccgttccccgctccatccccaatctagcggaggtaaagaagaaa
ggcaaaatgaagaagctcggccaagcaatggaagaagacctaatcgcgggactgcaaggg
atggatctgaaccttgaggctgaagcactggctggcactggcttggtgttggatgagcag
ttaaatgaattccattgcctctgggatgacagcttcccagaaggccctgagcggctccat
gccatcaaagagcaactgatccaggagggcctcctagatcgctgtgtgtcctttcaggcc
cggtttgctgaaaaggaagagctgatgttggttcacagcctagaatatattgatctgatg
gaaacaactcagtacatgaatgagggagaactccgcgtcctagcagacacttacgactca
gtttatctgcatccgaactcatactcctgtgcctgcctggcctcaggctctgtcctcagg
ctggtggatgcggtcctgggggctgagatccggaatggcatggccatcattaggcctcct
ggacatcacgcccagcacagtcttatggatggctattgcatgttcaaccacgtggctgtg
gcagcccgctatgctcaacagaaacaccgcatccggagggtccttatcgtagattgggat
gtgcaccacggtcaaggaacacagttcaccttcgaccaggaccccagtgtcctctatttc
tccatccaccgctatgagcagggtaggttctggccccacctgaaggcctctaactggtcc
accacaggtttcggccaaggccaaggatataccatcaatgtgccttggaaccaggtgggg
atgcgggatgctgactacattgctgctttcttgcacgtcctgctgccagtcgccctcgag
ttccagcctcagctggtcctggtggctgctggatttgatgccctgcaaggggaccccaag
ggtgagatggccgccactccggcagggttcgcccagctaacccacctgctcatgggtctg
gcaggaggcaagctgatactgtctctggagggtggctacaacctccgcgccctggctgaa
ggtgtcagtgcttcgctccacacccttctgggagacccttgccccatgctggagtcacct
ggtgccccctgccggagtgcccaggcttcagtctcctgtgctctggaagcccttgagccc
ttctgggaggttcttgtgagatcaactgagaccgtggagggggacaacatggaggaggac
aatgtagaggagaatgaggaggaaggaccctgggagccccctgtgctcccaatcctgacg
tggccagtgctacagtctcgcacagggctggtctatgaccaaagtatgatgaatcactgc
aacttgtgggacagccaccaccctgaggtaccacagcgcatcttgcggatcatgtgccgt
ctggaggagctgggccttgctgggcgctgcctcaccctgacaccgcgccccgccacagag
gctgagctgctcacctgccacagtgctgagtatgtgggtcatctccgggccacagagaaa
atgaaaacccgggagctgcaccgtgagagttccaactttgactccatctacatctgcccc
agtaccttcgcctgtgcacagcttgccactggcgctgcctgccgcctggtggaggctgtg
ctctcgggagaggttctgaatggtgctgctgtggtgcgtcccccaggacaccacgcggag
caggatgcagcttgcggtttttgctttttcaactccgtggctgtggctgctcgccatgcc
caggctatcagtgggcgtgccctgcggatcctgattgtggattgggatgtccaccatggt
aatggaactcagcatatgtttgaggatgaccccagtgtgctatatgtgtccctgcaccgc
tatgatcatggcaccttcttccccatgggggatgagggtgccagcagccagatcggccgg
gctgctggcacaggcttcaccgtcaacgtggcatggaacgggccccgcatgggtgacgct
gactacctagctgcctggcatcgcctggtgcttcccattgcctacgagtttaacccagaa
ctggtgctggtctcagctggctttgatgctgcacggggggacccgctggggggctgccag
gtgtcacctgagggttatgcccacctcacccacctgctgatgggccttgccagtggccgc
attatccttattctagagggtggctataacctgacatccatctcagagtccatggctgcc
tgcactcgctccctccttggagacccgccacccctgctgaccctgccacggcctcctcta
tcaggggccctggcctcaatcactgagaccatccaagtccatcgcagatactggcgcagc
ttacgggtcatgaaggtagaagacagagagggaccctccagttctaagttggtcaccaag
aaggcaccccaaccagccaaacctaggttagctgagcggatgaccacacgagaaaagaag
gttctggaagcaggcatgggaaagatcacctcggcatcatttggggaagagtccactcca
ggccagactaagtcagagagagctgtggtggccctcactcaggaccagtcctcagaggca
gccacagggggagccacactggcccagaccatctctgaggcagccgttgggggagccata
ctgggccagaccacctcagaggaggctgtcgggggagccactccggaccagaccacctca
gagaagactgtgggaggagccactctggaccagaccacctcagaggatgctgttggggga
gccacgctgggccagactacctcagaggaggctgtaggaggagctacactggcccagacc
acctcggaggcagccatggagggagccacactggaccagactacgtcagaggaggctcca
gggggcaccgagctgatccaaactcctctagcctcgagcacagaccaccagaccccccca
acctcacctgtgcagggaactacaccccagatatctcccagtacactgattgagagtctc
aggaccttggagctaggcagcaaatctcagggggcctcagaatctcaggccccaggagag
gagaacctactaggagaggcagctggaggtcaggacatggctgattcgatgctgatgcag
ggatctaggggcctcactgatcaggccatattttatgctgtgacaccactgccctggtgt
ccccatttggtggcagtatgccccatacctgcagcaggcctagacgtgacccaaccttgt
ggggactgtggaacaatccaagagaattgggtgtgtctctcttgctatcaggtctactgt
ggtcgttacatcaatggccacatgctccaacaccatggaaattctggacacccgctggtc
ctcagctacatcgacctgtcaacctggtgttactactgtcaggcctatgtccaccaccag
gctctcctagatgtgaagaacatcgcccaccagaacaagtttggggaggatatgccccac
ccacactaa
DBGET
integrated database retrieval system
