Thermococcus kodakarensis: TK0553
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Entry
TK0553 CDS
T00226
Name
(GenBank) nucleic acid-binding protein, containing OB-fold domain
KO
K06932
tRNA(Ile2)-agmatinylcytidine synthase [EC:
6.3.4.22
]
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tko03016
]
TK0553
Enzymes [BR:
tko01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.22 tRNAIle2-agmatinylcytidine synthase
TK0553
Transfer RNA biogenesis [BR:
tko03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
TK0553
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1743
tRNA_anti-codon
tRNA_anti_2
Prok-RING_1
TF_Zn_Ribbon
OrfB_Zn_ribbon
Ribosomal_S27
C1_2
RNA_POL_M_15KD
Motif
Other DBs
NCBI-ProteinID:
BAD84742
UniProt:
Q5JF46
LinkDB
All DBs
Position
475775..477049
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AA seq
424 aa
AA seq
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MIIHIGIDDTDSPNGMCTTYLGAILYRELSRLAEPLDLPRLIRLNPNIPYKTRGNGAVAM
TFEASEDIIPEIKDTVLFYVSQLADFEHENTNPGVVFLEGDVPNELRKFSLRALREHVTI
GEAEEVARKVGAEYFKFKLGRGVIGSLAAIGYPLERFTYELLAYREREYWGTPRRVNEES
VFLADKWAYPFSYDNVDPYKRVVLITPHGKDPVLVGIRGIDKGKVLQVFEMVEFEEPVAF
YQLYKTNQNTDDHLTPKRIGELKLYDSAVVRGWVASPYWERGRHVFFELEDETGKIRVAA
FEPTKKFRNWVRKLLPGDEIIAAGGVKEHEGILTLNLEKFYPVELVPKVEYRKPKCPVCG
GTMKSKGDYLKCKRCGYKMPKRLIPVEVPRDLERKIYEVPPDARKHLSRPLVLPGGEERL
MELL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgataatccacattggaattgacgatacggactctccaaatggtatgtgcaccacatac
ctgggtgccatcctctaccgcgagctctcaaggttagccgagcccttggacctgcccagg
ctgatccgcctgaacccgaacatcccctacaagacgcgcggaaacggtgcagtcgcgatg
actttcgaggccagtgaggacattatccccgaaatcaaggacacggttcttttctacgtt
tcgcagctggcggattttgaacacgagaacacaaaccccggcgttgtcttccttgaggga
gatgttcctaacgagctgagaaagttctcgctgagagcactgagggagcacgtgaccata
ggggaagccgaggaagttgcgagaaaggttggggctgaatacttcaagttcaagctcggg
aggggggtaatcgggtccctcgcggcaattggctacccccttgagaggtttacctatgag
cttctggcctaccgggagcgggagtactgggggacgccgagaagggtaaacgaggagagc
gtctttctggcggataaatgggcttatcccttcagctacgacaacgtggacccctacaag
cgtgttgttctgataacaccccacggaaaagaccctgtccttgtgggaatccgcgggatt
gacaagggcaaagttctccaggtctttgaaatggtggagttcgaggaaccagtggctttc
taccagctctacaagacgaaccagaacaccgacgaccacctcacccccaagaggatcggc
gagctaaagctctacgacagcgcggtcgttagggggtgggttgcttcgccatactgggag
cgtggaaggcacgtgttcttcgagcttgaggacgagacagggaagattcgcgtggcggcg
ttcgagccgaccaagaagttccgcaactgggtgcgcaagctcctccccggcgatgaaatc
atagccgctggcggcgtcaaggagcacgagggcatcctaacccttaacctcgaaaagttc
tacccggtcgagctggttccgaaggttgagtacagaaaaccaaaatgcccggtctgcggt
gggaccatgaagagcaagggcgactacctgaagtgcaagcgctgtggatacaaaatgccg
aaaaggctaatccccgttgaagtcccccgagatctggagagaaagatctacgaggttccc
cccgatgccaggaagcacctctcaaggccgcttgtccttcccggtggggaagagcggctg
atggaactactgtaa
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