Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030481G001
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Entry
GSTEN00030481G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTEN00030481G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00030481G001
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00030481G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00030481G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00030481G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
GSTEN00030481G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
GSTEN00030481G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
GSTEN00030481G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
GSTEN00030481G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
zf-RING_6
Ank
Ank_4
Ank_5
Ank_3
BRCT_2
BRCT
zf-RING_5
zf-RING_10
zf-RING_UBOX
zf-C3HC4_3
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
CAG09256
UniProt:
Q4RQS6
LinkDB
All DBs
Position
2
AA seq
477 aa
AA seq
DB search
WKNTKEAVANFRRLLLCSKCSKLMKEPVCLGMCEHVLCRSCAGPRAGDGCVVCHSPAWVK
DIQINRQLSSITEIFTNLESLLKPAEQPDHSLDNTKAEIECSVLKQKKSFKIWFSPRSRK
GDVEAVKELLDQGADPNLKDNAGWTPLHEACNLGHLAVVEVLVSRGALLNTPGYENDSPL
HDAVRNGHLAIAKLLLQLGASRNVLNLYGKQPADYAVSLEMREIFQHASDGTATPLSPSA
NLSVVSGSVRKEELVLLATKLLQPEQQQLVKLGQLLGGRVVDTFSASVSHIVLPEGQMCT
TFSTLLGVLAGCWVVKYTFNIISGTFNFFPHLCVLAGVQACLQAERWMPEAEHEAGEGPQ
RSRVNRCSLLPPLFDGCFFFLLGSFKSPSKDELARLLKEGGGQLLSRQPKPDSDVTQTVS
AAAYHAPAGSDQALCTQYIIFDPQGRHRPAVVRRGKVWSAPSTWIIDCIAAFCLLPV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
tggaaaaatactaaagaggctgttgcgaattttcgacgattgctgctttgctcaaaatgc
tccaaattaatgaaggaacctgtgtgtctaggaatgtgtgagcatgtgctatgcaggtcc
tgtgctggcccccgagcaggagatggctgtgtggtgtgccacagtcctgcgtgggtcaag
gacatccaaattaacaggcagctgagcagcattacagaaattttcactaatttggaatct
ctactcaaaccagctgagcagccagatcactctttggataacactaaagcagaaattgag
tgttctgtcttaaaacagaagaaaagctttaagatctggttcagcccccgcagtcgtaag
ggagatgtggaggctgtgaaagaactgttggaccagggtgctgaccctaacctgaaggat
aacgctgggtggacacctctgcatgaagcctgtaacctgggacacctggctgtggtggaa
gtgctggtgtccaggggagccctgctcaacacgccaggctacgagaacgactctcccctt
catgatgcggttagaaacggacacctcgccatcgccaaactactcttgcagctcggggcc
tcgcggaatgtacttaatctctatggaaagcagccggcagattatgctgtcagtctggag
atgcgggagattttccagcacgcctcagatggaacggcgacacctctcagtccctcagcc
aatctttctgtggtgagtggttctgtgaggaaggaagaactggtgctcttggccaccaag
ctgttgcagccagaacagcagcaactggtcaaactggggcagctgctgggagggagagtg
gttgacaccttttctgcctcagtgagccacattgtgctgcctgagggacaaatgtgcacc
accttctccacccttctgggtgtgcttgctggctgctgggtcgtcaaatacaccttcaac
atcattagcggtacctttaatttttttccccatctttgtgtgctggcaggggtgcaggca
tgtctgcaggcagaaaggtggatgcctgaagcagagcacgaagcaggagaaggcccacag
cgtagtcgcgtcaacagatgcagcctgctgccgccactcttcgacggctgcttctttttc
ctcctcggctcttttaagtcgccgtccaaagacgagctagccaggctgctcaaggaggga
ggaggtcagcttctgagccgacagcccaagcccgacagcgacgttacgcagaccgtgagc
gcggccgcctaccacgcgccagcgggctccgaccaggctctgtgcacacagtacatcatc
tttgacccgcagggacgtcacaggccggcggtggtgagacgggggaaggtgtggtcggct
ccgtccacgtggatcattgactgcatcgcggccttctgcctccttcctgtg
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integrated database retrieval system
