Thrips palmi (melon thrips): 117652244
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Entry
117652244 CDS
T08251
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tpal
Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpal01009
]
117652244
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpal03019
]
117652244
04131 Membrane trafficking [BR:
tpal04131
]
117652244
03036 Chromosome and associated proteins [BR:
tpal03036
]
117652244
Enzymes [BR:
tpal01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117652244
Protein phosphatases and associated proteins [BR:
tpal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117652244
Messenger RNA biogenesis [BR:
tpal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117652244
Membrane trafficking [BR:
tpal04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117652244
Chromosome and associated proteins [BR:
tpal03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117652244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
117652244
NCBI-ProteinID:
XP_034252879
UniProt:
A0A6P9A5T8
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MSTLRTGSANPDGALRRSHRLNTGQPTKQPTKPSAALLAAKRKAKQRSMNKKPNDIVRDI
YQNAMDAKVMSLQPTGLVYDRRMAEHRCLWDSTYPECPERLTRVLERCEELGLLKHCKEI
PVREATETELLAKHTPEQIEILKATENVTEEDYLEKLSSKYDAIYIHPSTYRLSLLAAGS
TIELVENICKGSVHNGMAIIRPPGHHAMKSEYCGYCFFNNVAVAANHALENLGLSRILII
DWDVHHGQATQQMFYDDPRVVYFSIHRYEHGTFWPNLRESDFDYVGKGKGAGFNFNVPLN
ATGMADADYLAIFQQVLLPMACEFQPELIIVSAGYDAAIGCPEGEMEVTPAFYAHLINSL
SALSNGKLAVVLEGGYCLRSLAEGAALTLRALLGHPTPQLPPMDPPCDVIRNTILDVIYS
HRSHWDCFKMQDTWSLAEQENKEPETSLQARHIPRAIFFGPNGPPPTSFETRNCYPVQSS
VFLMSVASKLNSLISSTKLYQPPHKMCVVYDSRMLKHFNRNEESHPERPERVSSIQTMLE
DYGLLQRSHILPPRVATEEELLMVHTQSHITAMQSLANESQEEMNKQQEKLHSVYLHNNS
YESASVAAGCVLQVVDSVLTGESATGVAVVRPPGHHAESDKACGFCVFNNVSLAAKYAIE
KHGLSRVLLVDWDVHHGNGTQHIFESDPRVLYISLHRYDNGNFFPGSLDAGHDRVGTGKG
EGFNVNIPWNKKGMSDGDYVAAFHQIVLPIAYQFNPELVLVSAGFDAAVGDPLGGCKVSP
ECYGHLTHWLKALAGGRVVLCLEGGYNLNSISYAMTMCSKALLGDPLPMLEQGSVASVNG
VQSIRTVVATQQKYWPCLKFQVALPLEDDILSSQESSEDLTRMLAKVQLTEREISMNHHK
DHDASTTKTTTAANYTPMVAAPAPDHSKAGSSSDANSSAGTSAGGSGEGSSFGSARGGDG
SRPTLVDFLSENMQMLAEERMFAVVPLSDCPHLPSVEPVPERGIDTNALCESCSSPQENW
TCLVCYKVLCGRYVNEHMSGHGHEVGHPLTLSFSDLSVWCYECEAYIDNAILYAAKNAAH
RSKFGEDLPWSYGDQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactttgaggacaggatctgcaaatcctgacggagcattacgacgctctcaccgt
ctgaacactggacaaccgacaaaacagcctaccaaaccctctgcagctttattggcagcc
aaaaggaaggctaaacagcgtagtatgaacaagaaaccaaatgatattgttagagacatc
tatcagaatgcaatggatgcaaaggtcatgtctcttcaaccaactggcctggtttatgac
agacgaatggctgaacatcgttgtctgtgggattcaacttacccggaatgccctgagcgc
ttaaccagagttcttgaaaggtgtgaagaacttggtcttttaaagcactgcaaagaaatt
ccagtccgagaagctacagaaacagagcttcttgccaaacataccccagagcagattgaa
attttaaaggcaactgaaaatgtaacagaggaagattaccttgaaaagctttcctctaaa
tatgatgcaatttacatacacccgagtacttatcgtctctccctgctggctgctgggagt
accatagaactggtggaaaatatttgcaaaggttcagtccataatggaatggcaataata
agaccaccaggtcatcatgccatgaaaagtgaatactgtggatactgctttttcaacaat
gtggctgtagctgccaaccatgcccttgaaaatttgggtctctctcgcattttaattatt
gattgggatgttcatcacggccaagccactcagcaaatgttctatgatgatcctagagtt
gtctacttttcaattcatcgttatgagcatggaacattttggccaaatcttcgagaaagt
gattttgactatgtgggaaaagggaagggagctggatttaactttaatgtgcctttgaat
gccactggtatggctgatgctgattatttagctatctttcagcaggtgctacttcccatg
gcttgtgagtttcagccagaacttattatagtctcagcaggatatgatgctgcaatcgga
tgtcctgagggagagatggaagttacaccagctttttatgctcatttaatcaacagcctg
tctgctctttcaaatggaaagttggctgtagttcttgagggtggctattgtcttcgctcc
ttagcagaaggagctgccctgactctgcgagccctactggggcatccgaccccacaactt
ccaccaatggaccctccatgtgatgttatacgtaacactatattagatgtcatctactct
caccgttcacattgggactgcttcaaaatgcaagacacatggtcgctagcagagcaagaa
aataaggagccagaaacttctctccaagcccgacacatacccagagctattttctttggt
ccaaatggacctcctcccacatcctttgagacaaggaactgctatcctgttcaaagctct
gtattcttgatgtctgtagcatcaaagttgaatagcttaatatcaagtacaaagctttat
cagccgcctcacaagatgtgtgtggtctatgattcccgcatgctgaaacatttcaatagg
aatgaagagtctcatccagaaagacctgaaagggtttcaagtattcaaactatgcttgag
gattatggattgctgcagagaagccacatcctcccacctcgcgtggccacagaagaagag
cttctgatggtacacacacaaagtcacataacagcaatgcaatctttggccaatgaatct
caagaggaaatgaataaacaacaagaaaaacttcattcagtataccttcataacaattcc
tatgaatctgcatctgttgctgctgggtgtgtgcttcaggttgtggattctgtattgact
ggggaaagtgcaactggagtagctgtggtccgacctccaggacaccatgctgagtctgat
aaggcctgtggcttttgtgtattcaacaatgtttcacttgctgcaaagtatgcaattgaa
aagcatggcctctccagggttcttttggtggattgggatgtgcaccatggtaatggtact
caacacatttttgaatcggatccacgtgttctctatatttcacttcatcgctatgacaat
ggcaacttctttcctggctctttggatgctggtcatgaccgcgttggaactgggaagggt
gaagggttcaatgtcaacataccttggaataagaaaggaatgagtgatggtgactatgta
gctgcattccaccaaattgttctacccattgcataccaattcaaccctgaattggtcttg
gtctcggctggatttgatgcagcagtaggggaccctcttggcggctgcaaagtttctcct
gaatgctatggtcaccttacgcactggctcaaggctttagctggtggccgtgtggttctt
tgcctagaaggtggatacaatttgaattctatatcctatgctatgacaatgtgttcaaag
gcactattgggcgatccccttcccatgctggaacaaggatcagttgcaagtgtgaacgga
gtgcaaagcatacgtactgttgttgccactcagcaaaaatattggccatgtttaaaattc
caggtcgctctgccgctagaggatgatatactctcctctcaagaaagttctgaggatctt
acaaggatgctagctaaggttcaattgactgagagagaaatttcaatgaatcatcataaa
gaccatgacgcaagcaccaccaaaactaccacagctgcaaactacaccccgatggtggca
gcaccagcacctgaccactctaaagctggttcttcatctgatgcaaattcatctgctgga
acaagtgccgggggaagtggtgaaggatcatcctttggctcagccagaggtggagatggt
agccgcccaacacttgttgactttttatcagagaatatgcaaatgcttgctgaagaaaga
atgttcgctgttgttccgttgtctgactgtccacatttaccaagcgtggaacctgtgcct
gaaagaggaattgacacaaatgcactttgtgaatcatgcagcagtcctcaagagaactgg
acttgtcttgtttgttacaaggttttatgcggtcggtatgtcaatgaacatatgtctgga
catggccatgaagtagggcatcctttgacccttagtttctctgatttatcggtttggtgt
tatgaatgtgaagcttacattgataatgcgatcttgtatgcggctaaaaatgcagctcac
cgaagcaaatttggagaagacttaccatggagctatggagatcagtga
DBGET
integrated database retrieval system
