Triticum urartu (red wild einkorn wheat): 125507954
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Entry
125507954 CDS
T08232
Name
(RefSeq) histone deacetylase 15 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tua01009
]
125507954
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125507954
04131 Membrane trafficking [BR:
tua04131
]
125507954
03036 Chromosome and associated proteins [BR:
tua03036
]
125507954
Enzymes [BR:
tua01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125507954
Protein phosphatases and associated proteins [BR:
tua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125507954
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125507954
Membrane trafficking [BR:
tua04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125507954
Chromosome and associated proteins [BR:
tua03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125507954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zinc_ribbon_2
Motif
Other DBs
NCBI-GeneID:
125507954
NCBI-ProteinID:
XP_048528454
LinkDB
All DBs
Position
5:72417988..72428342
Genome browser
AA seq
614 aa
AA seq
DB search
MTSNMRPLNSKKGEVPSHGRENCGVSDQAFHGKCQSCDGVGKPSYPRANGVSLKESGTCS
FSCDHANALLVDGPKGSPARPGHIDSAVCAQHGCLHAKNESCMPCNDLQQESDREQAGDT
LDDLFFFNDEEDDDIDWEPSARLAENRWFCLNCTMPNLDEVKHCLNCHELKGSEVAAGYD
VFKTHIARAALLSADTASVLVSTAIGFDERMLLHSEMEIKPNPHPERPNRLRAIAASLAA
AGIFPSKCALVPPREITKEELVMVHTSDHVESVEQTKNMLYSYFTSDTYANGHSACAAKL
AAGLCADLASSIVSGRVRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAQKAGAKKV
LIVDWDVHHGNGTQEIFEGNKSVLYISLHRHEDGSFYPGTGASDEVGVLDGKGFSVNIPW
SCGGVGDNDYIFAFQHVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSQMTSM
LTACSEGKLLVILEGGYNLRSISSSATEVVKVLLGDGPSYGTDAAAPSREGMQTVLQVLD
IQQKYWPVLVPIFASLQAQQGPTSSKYVNAENKLKRRMLTGGPGPVWWKWGSKRLLYEVL
FEGRRPRKSSAKGK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaacatgagaccgcttaacagcaaaaagggtgaggtcccttcccatggtcgt
gagaactgtggagtttctgaccaagcttttcatggcaaatgtcaaagctgcgatggtgtt
ggaaaaccatcttatcctagagcgaatggcgtttccctgaaagaaagtggaacatgcagt
tttagttgtgatcatgctaatgctttattagtagatgggcccaaaggttcgccagcaagg
ccaggacatattgacagcgcagtttgtgctcagcatggttgtctgcatgccaagaatgaa
agttgcatgccttgcaatgatctgcagcaagagtctgatagagaacaagctggagatacc
ctggatgatctgtttttctttaacgatgaagaggatgatgatattgactgggaaccttct
gctcgcctggctgaaaacagatggttttgcttgaactgtacaatgccaaacttggatgag
gttaaacattgcctgaattgccatgagcttaagggatctgaagtagctgctggatatgat
gttttcaaaactcacattgcgcgggcagctttgttatctgctgacacagcatcggtactg
gtatctacagcgattggttttgatgaaagaatgttgctccacagtgagatggaaattaaa
ccaaatccacatccagaaagacccaaccgtcttcgtgcaattgctgccagtctggctgct
gcaggaatatttccctcaaagtgtgccttggtacctcctcgagaaatcactaaggaggaa
ctcgtaatggtccatacttcagatcacgtcgaaagcgtagagcagacaaagaacatgctt
tacagttacttcacttcggatacttacgcgaatggacactcggcatgtgctgccaaactt
gcagcaggcctatgcgccgatcttgctagttcgatagtgtctggccgtgtccggaatggc
tttgcgctggtgagacctcctgggcatcatgctggggtaaagcaagccatgggcttttgt
cttcacaacaatgcagcagtggctgcattagctgcacaaaaagcaggcgctaagaaagtc
ttgatagttgactgggatgtgcaccatggcaatggcacacaggagatatttgaagggaac
aaatcagttttgtacatatcattacatcgccatgaggatggaagcttctaccctggaact
ggagcatcagacgaggtgggagttttggatggtaaaggattctcggtaaatataccttgg
agctgtggtggtgttggagacaatgactacatctttgcttttcagcacgtggtgcttcca
atagctacagaatttgccccagacatcaccattatatctgcaggatttgatgcagcaagg
ggtgatcctctgggttgttgtgatgtcactcctgccggatactctcagatgacgtccatg
ttaactgcttgctcagaaggaaagttgttggttatacttgagggaggatacaatcttcgg
tctatatcctcatctgcaactgaagttgtcaaggtcctactcggggacggtccaagttat
ggcacagatgcagcagcaccatcaagggagggcatgcagactgtcttacaagttctggac
atccagcaaaaatattggccagttttagttccaatctttgcatcacttcaagcgcagcag
gggccgacttcttccaaatatgttaacgctgaaaacaagctgaagagaaggatgctcacc
ggaggaccagggcccgtgtggtggaaatggggaagcaagaggcttttgtacgaagtactg
tttgagggccgccgtccaagaaagagcagtgcgaaaggaaaatga
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