Tripterygium wilfordii (thunder duke vine): 120013863
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Entry
120013863 CDS
T07256
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120013863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120013863
04121 Ubiquitin system [BR:
twl04121
]
120013863
03036 Chromosome and associated proteins [BR:
twl03036
]
120013863
03400 DNA repair and recombination proteins [BR:
twl03400
]
120013863
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120013863
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
120013863
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120013863
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120013863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_2
BRCT
zf-C3HC4_2
zf-HC5HC2H
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_6
zf-HC5HC2H_2
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-rbx1
zf-Nse
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
120013863
NCBI-ProteinID:
XP_038721752
LinkDB
All DBs
Position
13:13966401..13972094
Genome browser
AA seq
993 aa
AA seq
DB search
MGDPVHLERMGRELKCPICLSLLNSTVSLPCNHVFCNLCIMKSMKSDSSCPVCKVPYRRR
EIRAASHMDNLVSIYKSMEVASGINIFVTQNAPPTRLSDEEKCEDVAKCDGQETSKGKRL
RKSVKPKLLGPTNAKPSFPTKKRVQVPQYPLSETPKQPMKSGNGYGENTEDGSKSSSLIS
KENMALNGKEKPQLSPFFWLRDEDAENLSQDTDMDQSIDMTPPIVPSFSDIKDSYDDNPT
GFYPTGKVCGKSSGTDVFDSEMFEWTQRACSPELFSSPVKEKVSNTNSERNDGSRRKISE
LVSQCTNTKENSSHDNARKLNTKQGTGCKEKISLTYSSSRTRSTHSEILKEKPDKKSGKA
RETARKKFSKKNAHQSNVFHVNLNEDSENFSQTSKRVSPNSDDSAKRMKACSSTTAVKLT
PENLPAVSVRAESDNILGTGRLLDSSSKSAYHETDHGLRSKRQKVDSLKISRLEEVPAVH
NQANEDTIAQVSLSVPLDDNKKASASTIPNKHNKAIRLPSRSKSNREMKQNKKVSFDCSS
KNVLVDGIQDSHTDVSTKEFHLTEKIEGSIHVSVVDGLLEAEKLSLTNRVALSKCGSVTS
KIQCSFCLSSEDTEASGEMIHYLNGKPVSADYNGGSKIIHSHRNCSEWAPNIYFEADTAI
NLEAELVRSRRIKCCVCGLKGAALGCYETSCRKSFHIPCAKLIPQCRWDAENFVMLCPLH
LSSKLPSGISGSQERKLKKCIPKVKPYTQYNNVADIDGMNASRKRKLCKAFDKIVLCCSA
LTVGEREIISEFERFSGVTVLKTWNSSVTHVIASVDDNKACKRTLKILMGILEGKWILNI
EWVKACINAMEPIDEEQYEITVDIHGIRDGPRLGRLRVANKQPRLFDGFMFHFVGDFVPS
YKSYLQDLVVAGGGAILHRKPVSGQVFGSPAASTFIVYSQELPERCDPGKSIMTLSKRHS
DAEALASSTGTTVVSNLWVLNSIAACKLQGIGE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgggggatccggttcacctggagagaatgggcagagaactcaagtgccctatctgctta
agtttgctgaactctacagtttctcttccgtgcaatcatgttttctgcaatttgtgtatt
atgaaatcaatgaaatcagattccagttgtcctgtttgcaaagtgccatataggcgaaga
gagatccgtgctgcttctcacatggataacttggtgagcatttacaaaagcatggaagtt
gcttcaggaatcaacatatttgtcactcagaatgctcccccaacaagattatcagatgaa
gaaaaatgtgaagatgttgccaagtgtgatgggcaagaaacatctaaaggaaagagattg
cgcaaatcagttaaacccaagctgttgggtcctactaacgcaaagccttcctttccaacc
aagaaaagggttcaagttccccaatatcctctctcggagaccccaaaacaacccatgaaa
tctggaaatgggtacggtgaaaatactgaggatggatcaaagagcagctcactcatttca
aaggaaaatatggctttaaatggaaaagaaaagccacagctttcgcctttcttttggttg
agagatgaagatgcagaaaacttgagtcaggatactgatatggatcaatcaatagatatg
acaccacccattgttccttctttcagtgatatcaaggactcttatgatgacaaccccact
ggattctatccaacgggaaaagtttgtggcaaatcctctggcactgatgtctttgatagc
gagatgttcgaatggacacaaagagcttgctcccctgaactgttctcgagtccagtcaaa
gagaaggtttcaaatacaaacagtgaaaggaatgatggaagtcggcgtaaaatatctgag
ctagtgtcacagtgtacaaatacaaaagaaaactctagccatgacaatgcaagaaagttg
aataccaaacaaggaactggttgtaaggaaaagatatcactgacatactcatcttcgagg
acgcgaagtactcattctgaaattttgaaagagaagcccgacaagaaaagtgggaaggct
agggaaacagccaggaagaagtttagtaagaaaaatgcacatcaaagtaatgtgtttcat
gttaacttaaatgaagattctgaaaattttagtcaaactagcaagagagtatctccaaat
tcagatgatagtgcgaaaaggatgaaggcctgttctagtactactgcagtgaaactgaca
cctgaaaatcttcctgctgtctcagttagggcagaaagtgataacatcttagggactggg
aggctacttgattcatcaagtaagagcgcctatcacgaaactgatcatggtttgagatca
aagagacaaaaggtagattccctgaaaatcagcagacttgaagaagttcctgcagttcac
aaccaagcaaatgaagatacaattgctcaagtctccttgtctgttcctctggatgataat
aagaaagcatctgcttcaacaatacccaataagcataacaaggcaatcaggcttcctagt
agatcaaaatccaatcgagagatgaagcagaacaaaaaggtttcgtttgactgcagctca
aaaaatgttttggttgatggcattcaagacagtcatactgatgtttctacaaaggaattt
cacttgactgaaaagattgaaggcagcattcatgtttctgttgtggatggtttgttagag
gccgagaagctttctttaacaaatagagtggctttgagcaaatgtggttctgttactagt
aaaattcagtgttctttctgtctttcttcagaagatactgaggcttctggagagatgatc
cactaccttaacggtaaacctgtttctgcagattataatggaggatcaaagatcatacat
tcacataggaactgcagtgaatgggccccaaatatctattttgaagctgatactgcgatt
aatcttgaagctgagttagttcggagtcgaagaattaaatgctgtgtctgtggactcaaa
ggcgctgcacttgggtgttatgagacgagttgtcgcaagagttttcatattccttgtgca
aagttaatcccacaatgtcggtgggatgctgaaaattttgttatgctatgcccccttcat
ctctcctcaaagctcccaagtggaatttccggatctcaggaaaggaaactaaagaaatgc
attccaaaagtcaagccatacactcaatacaacaatgttgctgatatagatggcatgaat
gcaagtaggaagaggaaactgtgtaaagcatttgacaaaatcgttctatgttgttcagct
ctcacagttggagagagggaaattatttctgaatttgagagattttccggagttacagta
ttaaagacttggaattcaagtgtcacccatgttattgcatctgtagatgacaataaagca
tgtaaaagaaccctcaagattttgatgggcatcttggaggggaaatggatcttgaatatt
gagtgggttaaggcttgcatcaatgctatggagccaattgatgaggagcaatatgaaatt
actgttgacattcatggaatcagagatggtccacgtcttggtagactgcgagttgcaaac
aagcaaccaaggctttttgatgggttcatgttccattttgtgggagatttcgtaccttct
tataagagttatctgcaagatcttgtagtagctggtggaggagctatcctgcatagaaag
cctgtttccggacaggtatttggttcacctgcagcttcaaccttcatagtttacagccaa
gagctgcctgaaaggtgtgatccgggtaaaagtattatgactcttagtaagaggcattct
gatgcagaagctctggcaagttccacaggaactacagtagtaagcaacttgtgggttttg
aactccattgcagcctgcaaattgcaaggtattggtgaatga
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