Vanessa cardui (painted lady): 124541721
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Entry
124541721 CDS
T09161
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124541721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124541721
04121 Ubiquitin system [BR:
vcd04121
]
124541721
03036 Chromosome and associated proteins [BR:
vcd03036
]
124541721
03400 DNA repair and recombination proteins [BR:
vcd03400
]
124541721
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124541721
Ubiquitin system [BR:
vcd04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
124541721
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124541721
DNA repair and recombination proteins [BR:
vcd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124541721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
BRCT
BRCT_2
zf-RING_5
Sina_RING
MATCAP
zf-RING_6
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
124541721
NCBI-ProteinID:
XP_046975614
LinkDB
All DBs
Position
28:complement(2184948..2186764)
Genome browser
AA seq
538 aa
AA seq
DB search
MSTEKLNKFLKALDAVTLDYTCGYCLELCKDPVTLSTCFHLICSEHFSNLRNCPTCNIPL
AGCTTFTDDRLDVCIKSTKELSNIFESFRNKNVLQNTKGESSNGTSKKRAIKEKAHSIET
SDKENKKTVRSNTNMTASEKSKKVENKNDNLNSTLLSTASSRVNKGAEKRNNKGETALHV
ACRLGKVDTVIDLLKQGANTNTKDNAGWTPLHEVVQNGRLDLVKILLQYNTLIDVPGQGN
ETPLHEAVRYNHREIAEELVKNGANIKSRNSKGETPIELASEDMKRTLEDAADNIIQTQG
ANVTIISELHAELDFEDIRVFCVSQFRTIHNKLKILSKHHSNLHIEAKLVKKVTHLIVDT
EDDGICTSSLDILQGIVSGLWIISAHWITKSTETNLEPFKDYEVKGVGNSSYLGPKNSRY
NKYKQLPGIFNGCHFYLHNFNTKYEISKLIVLTKAILTKLIIDAGGVVLRRVPNPELIPD
AEKLVPYHAKKDGKLTNCSHYIIFKDIYEPMYNMAHFKALPIGWLIECIEKYELCEPW
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaaaacttaataagttcttaaaagcattagacgcggtcactctggattac
acgtgcggttattgtctagaattatgcaaagatcctgttactttgagtacgtgttttcac
ttgatatgttcggaacattttagtaacttaagaaattgtcccacatgtaatataccgctt
gctggttgcacgaccttcactgacgatcgtttggacgtttgtattaagtccactaaagaa
cttagcaatatattcgaaagctttcgaaacaagaatgtgttacagaacacgaaaggcgag
agttccaatggtaccagtaaaaaacgcgccattaaagaaaaagcccacagcattgagact
agcgacaaggaaaataagaaaacagtcaggtcgaacacaaatatgaccgcttcagaaaaa
tctaaaaaagtagaaaacaaaaatgacaatttaaattctacattattgtcaacagctagt
tctagagttaataaaggtgcggaaaagagaaataacaaaggagaaactgcactacatgta
gcctgtcgtttaggcaaggtcgatactgttatagatctactgaaacaaggtgcaaacaca
aatactaaagacaacgcaggctggacccctttgcatgaagttgtacaaaatggtcgattg
gatttggtgaaaatcttgcttcaatataatacactcattgacgtccctggtcagggcaac
gaaacgcccctccatgaagccgtaagatacaatcacagagaaatagcagaggaattagtt
aagaatggtgcaaatataaaaagcagaaatagtaaaggcgaaacacctatagagctagca
tcggaagacatgaaaagaaccctcgaggatgctgctgataatattatccaaacccaaggt
gctaacgttacaataatttcagaattacatgcggaattagattttgaagatattagggtt
ttctgtgtgtcacaattccgcactatacacaataaactaaagatattatcgaaacatcat
tcaaacctacatatagaagctaaactcgtcaaaaaagtcactcatttaatagtagacacc
gaagatgatggtatatgtacatctagcttggatattttacaaggaattgttagtggactg
tggatcatatctgctcactggataactaaatcgacagaaacaaatctggagccgtttaaa
gattatgaagtcaaaggggtcggaaacagttcctacttaggccctaaaaattcacgatac
aacaaatataaacagctaccaggaatattcaacggctgccatttttatttacacaatttc
aacacaaagtatgaaatatcaaaattaattgttcttactaaagcaatattaactaaactg
atcatagatgcaggtggtgttgtgttacgacgtgtaccaaatccagaattaatacctgat
gcagagaaattagtaccgtatcatgcgaaaaaggatggaaaactcactaattgctcccat
tacataattttcaaggacatttatgagccaatgtataatatggctcactttaaggcatta
cccattggctggttaattgaatgtatagagaaatatgagctatgtgaaccttggtga
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