Vollenhovia emeryi: 105559273
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Entry
105559273 CDS
T06016
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
vem
Vollenhovia emeryi
Pathway
vem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105559273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vem03400
]
105559273
Enzymes [BR:
vem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105559273
DNA repair and recombination proteins [BR:
vem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
105559273
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105559273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
NTP_transf_2
HHH_3
Cdd1
HHH
HHH_2
DUF3701
DUF4332
PTS_IIB
Motif
Other DBs
NCBI-GeneID:
105559273
NCBI-ProteinID:
XP_011862829
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MGKRKATGNANNPNQDLCDFLLELADYERNVSKNVYKYNAYRKAAGTLGALTERVKSGEE
AKKLPGIGAKIAKKIDEFLQTGKLQKLENIKKDGTNVAISLLAQVSGIGPAKAKELVDAG
IKTLEDLKKHQDKLTHHQKLGLKYFDDFEKKIPRAEIVQIEKTLRSAVKELDSAYLVTIC
GSYRRGKEESGDIDVLVTHPDYTSKAKDEKKKKAVSLKAIVECLEKKRLITDTISLGTSK
FMGVCRSPEDKGKPFRRLDIRLTFYDQYYCAILYFTGSDLFNKFMRAHALERKYTLNEYA
LKRLTVEGCPGEAEKITSEEDVFKFLDLPYKDPKNRNM
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaggaaggccacgggcaacgcgaacaatccaaatcaggatttgtgcgacttt
ttgttagaactggcggattacgagcgtaacgtcagcaagaacgtttacaagtacaatgcg
tatcgcaaggcggctgggacactaggcgccctgacggagagagtaaagagcggcgaggag
gcgaagaagctgcctgggataggagcaaagatcgccaagaagatcgacgagtttttacag
actgggaaactgcagaagctggaaaatattaagaaggatgggaccaacgtcgccatcagt
ctactggcccaggtgtccggcataggtcccgccaaagcgaaggaattggtggacgccggt
atcaagacactggaggatctcaagaagcaccaggacaagctcacgcatcatcagaaactg
ggactgaagtacttcgacgactttgagaaaaagatacccagagcagaaattgtgcagata
gagaagacactgaggagcgccgtcaaggagctggacagtgcctacctcgtgaccatctgc
gggagttacagacgcggcaaggaggagagcggcgacattgacgttctcgtcacgcatccc
gattacacgtcgaaggcgaaagatgagaagaagaagaaggccgtgtcgttaaaagcaatc
gtcgagtgtctcgagaagaaacgactgattacggatacgatatctcttggaacctcgaaa
tttatgggagtgtgtcggtcacctgaagacaaaggcaaacctttcagacggttggacata
cgtcttacgttttacgatcaatattattgcgccatactttatttcacaggaagtgatctg
ttcaacaaatttatgagggcgcatgcattggaaaggaaatacacgctgaatgagtacgca
ctgaagcgtctcacagtcgaaggctgtccgggagaagctgagaaaattacgtctgaagag
gacgtcttcaaattcctagatttgccctacaaagatccaaaaaacagaaatatgtaa
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