Viridibacillus sp. JNUCC-6: JNUCC6_05545
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Entry
JNUCC6_05545 CDS
T06874
Name
(GenBank) SH3 domain-containing protein
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij01502
Vancomycin resistance
vij02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JNUCC6_05545
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JNUCC6_05545
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vij01002
]
JNUCC6_05545
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vij01011
]
JNUCC6_05545
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
vij01504
]
JNUCC6_05545
Enzymes [BR:
vij01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
JNUCC6_05545
Peptidases and inhibitors [BR:
vij01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
JNUCC6_05545
Peptidoglycan biosynthesis and degradation proteins [BR:
vij01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
JNUCC6_05545
Antimicrobial resistance genes [BR:
vij01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
JNUCC6_05545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
SH3_3
SH3_4
VanY
SH3_2
Motif
Other DBs
NCBI-ProteinID:
QOV12230
UniProt:
A0A7M2QY60
LinkDB
All DBs
Position
complement(1126443..1127294)
Genome browser
AA seq
283 aa
AA seq
DB search
MNIKKILIASSVLGLLFTLGIAGVSQTASAQASPAKKSLNKTLKATTAVNMRKGIGTKYK
KIMTVEKGIFVKATKYSKGWYKVSANGKTGWVSGKYLASAPANYKDAGLVELSEKDGFII
DLKYATKKNFMGYALYPKDSKALVAKSTAAKLKKANQLAHKNGYNIKIWDVYRPLSVQWE
MYNKIQNHNYVANPALDSNHSKGVSVDVTLVDSKGKELKMPTKFDSFSTKAGRYYKGNSK
TAQKNMDYLTKIMTQSGFKTINSEWWHYNDLSTTHPTLDVPTK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatcaaaaaaatcttaattgctagctcggtacttggcttactgtttactcttggt
atcgctggggtatcacagacagcatctgctcaagcttcaccagctaaaaagtccctaaat
aaaactttaaaagcaacaacagctgtgaatatgagaaaaggaatcggcacaaaatacaaa
aaaatcatgacagttgaaaaagggatatttgtgaaagcgactaagtactcgaaagggtgg
tacaaagtaagtgctaacggtaaaacggggtgggtctctggtaaatacctagcatcagca
ccggcaaattataaggatgccggtcttgttgaattatccgagaaagatggctttatcata
gatttaaaatatgcgacgaagaaaaacttcatgggatatgcattatacccaaaagacagt
aaagcattggtggcaaaatcgacagcagcaaaattaaaaaaagccaatcaattggcacat
aaaaatgggtataacattaagatctgggacgtttatagaccgttatctgtgcaatgggaa
atgtacaacaaaattcaaaaccataactatgtcgcaaatcctgcgttagattctaaccat
agtaaaggagtcagtgtggacgtgacattagtagattcaaaaggtaaagaactaaaaatg
ccaaccaaattcgactcattttctactaaagcagggcgttactataaagggaactctaaa
acagcgcaaaaaaacatggactatttaacgaagattatgactcaatcgggctttaaaaca
atcaattcagaatggtggcattacaacgatttgagtacaacacatccaacattagatgta
cctacgaagtga
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